Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1095 ATGTCACAACTACCTTCAAAACTAGTACTGTTTCTATTATCCATCTTCATCATAATTACCACTTATTCTTCTTCTTCTCATACTTATGCTTCTGAAAAAGAACTAGAAGAAGCTTTTTTGTTGTTAAAGTTCAAGAACACTCAAGTTTCTTCTGATCCTAACAACTTCCTTTCAAACTGGAAAACAACCTTAAATTCTTCATCTCCTTGTACATGGTATGGTGTTTCATGCTCACATGATGGTCACGTGACATCCCTCAACCTTACCAAGTTTGAGTTACATGGTTTTCTTCACTTTCCAACATTAACAGCTTTACCCTTTTTACAACACCTTATTCTGCATGAGAATTACTTCACTGAAAGGAACAGTAACTTCTCAGTTTCATCTTTTTGCAGCCTTGTAACACTTGACTTGTCAAAAAACAATTTTTCTGGAAGGTTTCCATTTTCTGAACTAGTTTCATGTCATAATCTTAGTTACCTTAACTTGTCTCAGAATCTTATAACTGGAGCAGATAGTACAGAAAGAAGAACAGGTTTTGGTTTTTTTGGTGGTTCTTTGGTTCAACTTGATTTGTCTAGGAATCAGGTTTCTGAGGGTACCCTTTTGGAATACACTATTAGGAACTGTCAAAATTTGGTTTTGGTTAATTTTTCTGATAACAGAATCTCTGGTCAACTTAGTGGAACTGAAAATCTTGTTTCTTGTAGAAATTTGTCTACTTTTGACTTATCTCATAATCTGCTTAATGGAGAGATGCCAAATGGTTTTGATGGTGATTCAATTAAGCTTTTGGATCTTTCTAACAACAATTTTTCTGGTGTGTTCTCTGGGTTTGATTTAGGCCACTGTAGGAGCCTTGTTTCATTGAATTTGTCTCACAATGCACTTTCAGGAACTGAGTTTCCATCTAGCTTGGGTAATTGTCAGGTTCTGGAGACTCTAGATATTTCCCACAATGAGCTGAAGTTGAAGATTCCGGGGGTTCGTCTTTCGGGTTTGAAGAGCTTGAGGGAACTGTTTTTGGGGCATAATCAGTTTTATGGAGAAATACCTGAAGAACTTGGAAATGCTTGTAGTTCTCTTGTGGTGCTTGATCTATCTGAGAATAAACTCTATGGTGAGTTACCTTTGTCATTTGGAAAATGCTCTTCTTTACAAAGTCTTAATCTCGCGAAGAATTATTTATCCGGAGATTTCCTTAACTCAGTTGTAAGCAAACTTTCCAGTCTTAGATATCTCTATGCAGCATTCAATAATATCACAGGGCCGATTCCTTTATCGCTCACTAATTGTACACAGCTTCAGGTTCTTGATCTTAGTTCCAATGCCTTTACAGGCAATGTCCCTTCTGTGTTATGTTCAACCTCTAATTCTCCCCCAGCCTTGAAAAAGATACTTCTGGCTGGCAATTATCTTTCCGGGCAGGTGCCTGTAGAGCTTGGTCGCTGCGAGAATTTGAGGACGATTGATTTTAGCTTTAACAATTTGAATGGCCCAATACCCTCGGAAATTTGGTCCTTGCCTAATCTTTCGGACTTCATTATGTGGGCGAACAACCTCACTGGCGAGATACCTGAAGGCATTTGTGTCAATGGAGGAAATCTAGAAACCATGATTCTTAATAACAACTTCATTTCAGGCTCTATTCCTCAGTCAATTGCTAAATGCACCAATATGATTTGGGTGTCGCTTTCGAGCAATCGCATTACTGGTGGAATACCTGCTGGTATTGGTAATCTTGATAAACTTGCTATCCTTCAGTTGGGTAACAATTCACTTACTGGACTGATTCCACCAGAGCTCGGGAAGTGTAGGAGCCTGATATGGTTAGATTTGACTAGTAATAACCTAACCGGGACTATCCCATCTGAACTTGCCAATCAAGCTGGATTGGTTATTCCAGGAAGTGTTTCGGGGAAGCAGTTTGCATTTGTAAGAAATGAAGGTGGGACAAGTTGCAGGGGAGCTGGAGGGTTAGTTGAGTTTGAGGATATCAGGGTAGAGAGGCTGGAAGGTTTTCCTATGATTCATTCCTGTCCGTTAACACGAATATACTCCGGTTTGACAGTTTATACCTTCGCCTACAACGGCAGCATGATCTTCCTTGATCTTTCCTACAATACCTTATCCGGAAGTATTCCTGAAAACTTTGGTTCAATGAGCTATTTACAGGTCTTGAATATGGGACACAATAGGCTAACTGGAGCAATTCCCGAAAGTTTTGGTGGTCTTAAAGCGATAGGAGTGCTCGATCTCTCTCATAATAACCTTCAGGGATATATCCCCGGGTCATTAGGGACTCTATCTTTTCTAAGTGATCTTGATGTGTCTAATAATAACCTTACAGGCTCAATTCCTTCTGGAGGTCAGCTAACTACTTTCCCTGCATCTAGATATTTAAACAACTCTAACCTCTGTGGCGTCCCATTGCAGCCATGTGGCACTTCAAATCACTCGGCAAGTTTTTACACTTCGAAGAAGAATCAACCTATTGAAGCTGAGATCGTCGTTGGCATTGTTTCCCTGCTCCTATTTATTGTTGTGCTTTTATTCGCTTTATATCGAGTGAAGAGATACAGGAAGGAGGAACAAAGAGAAAAATATATAGATAGTCTTCCAACTTCAGGTAGCAGCAGTTGGAAAATTTCGAGTTTTCCTGAACCTCTAAGCATCAGCGTTGCCACTTTCGACAAGCCTCTGCGTAAGTTGAAATTCGCACATCTTCTCGAGGCTACTAATGGTTTCAGTGCTGAAAGCCTGATAGGGTCTGGAGGGTTTGGTGAAGTCTACAAAGCTAAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCGTGTCACGAGTCAGGGAGATCGAGAGTTCATGGCTGAAATGGAAACTATCGGGAAGATTAAGCATCGAAACCTGGTTCAACTGCTTGGTTACTGTAAAATCGGAGATGAGAGGCTTCTAGTGTATGAGTACATGAGATGGGGAAGTCTAGAGACTGTTCTACATGACAGGGCTAAAGGAGGAGGTTCAAAGCTTGATTGGGCTGCAAGAAAGAAAATTGCTATAGGATCGGCAAGAGGTCTTGCATTTCTTCACCATAGTTGCATACCTCACATAATACACCGGGATATGAAGTCTAGCAATATTCTTCTAGATGAAAATTTTGAGGCCAGAGTTTCCGATTTTGGCATGGCAAGATTGGTTGATGCCCTTGATACTCATCTAAGTGTCAGCACACTTGCGGGAACACCGGGTTATGTACCACCAGAATACTATCAGAGTTTTAGGTGCACAACGAAAGGCGATGTCTATAGCTACGGTGTCATATTGCTAGAGCTTCTTTCAGGGAAGAGGCCGATCGACTCTTCCGAGTTTGGCGATGACAACAATCTTGTCGGATGGTCGAAGCAGCTTCACAGAGAGAAAAGAGTTAATGATATACTAGATCCTGACTTAGTTATGCAAACATCTAGTGAAACTGAACTATACCAATATTTAAGAATTGCTTTTGAGTGTCTAGATGAAAGGCCGAATCGGCGACCAACCATGATACAAGTTATGGCAATGTTTAAGGAGTTTCAGGTTGACACAGATAGTGATATCTTTGATGGTTTCTCTGTGAAAGACAATGTTATTGATGAAGCATGA 3648 0.4038 MSQLPSKLVLFLLSIFIIITTYSSSSHTYASEKELEEAFLLLKFKNTQVSSDPNNFLSNWKTTLNSSSPCTWYGVSCSHDGHVTSLNLTKFELHGFLHFPTLTALPFLQHLILHENYFTERNSNFSVSSFCSLVTLDLSKNNFSGRFPFSELVSCHNLSYLNLSQNLITGADSTERRTGFGFFGGSLVQLDLSRNQVSEGTLLEYTIRNCQNLVLVNFSDNRISGQLSGTENLVSCRNLSTFDLSHNLLNGEMPNGFDGDSIKLLDLSNNNFSGVFSGFDLGHCRSLVSLNLSHNALSGTEFPSSLGNCQVLETLDISHNELKLKIPGVRLSGLKSLRELFLGHNQFYGEIPEELGNACSSLVVLDLSENKLYGELPLSFGKCSSLQSLNLAKNYLSGDFLNSVVSKLSSLRYLYAAFNNITGPIPLSLTNCTQLQVLDLSSNAFTGNVPSVLCSTSNSPPALKKILLAGNYLSGQVPVELGRCENLRTIDFSFNNLNGPIPSEIWSLPNLSDFIMWANNLTGEIPEGICVNGGNLETMILNNNFISGSIPQSIAKCTNMIWVSLSSNRITGGIPAGIGNLDKLAILQLGNNSLTGLIPPELGKCRSLIWLDLTSNNLTGTIPSELANQAGLVIPGSVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRVERLEGFPMIHSCPLTRIYSGLTVYTFAYNGSMIFLDLSYNTLSGSIPENFGSMSYLQVLNMGHNRLTGAIPESFGGLKAIGVLDLSHNNLQGYIPGSLGTLSFLSDLDVSNNNLTGSIPSGGQLTTFPASRYLNNSNLCGVPLQPCGTSNHSASFYTSKKNQPIEAEIVVGIVSLLLFIVVLLFALYRVKRYRKEEQREKYIDSLPTSGSSSWKISSFPEPLSISVATFDKPLRKLKFAHLLEATNGFSAESLIGSGGFGEVYKAKLKDGCVVAIKKLIRVTSQGDREFMAEMETIGKIKHRNLVQLLGYCKIGDERLLVYEYMRWGSLETVLHDRAKGGGSKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVDALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWSKQLHREKRVNDILDPDLVMQTSSETELYQYLRIAFECLDERPNRRPTMIQVMAMFKEFQVDTDSDIFDGFSVKDNVIDEA* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1095 1215 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 184 1201 - -
Lan4g1095 1215 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 16 121 - -
Lan4g1095 1215 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 129 255 - -
Lan4g1095 1215 ProSitePatterns Protein kinases ATP-binding region signature. 922 945 IPR017441 GO:0005524
Lan4g1095 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1039 1051 IPR008271 GO:0004672|GO:0006468
Lan4g1095 1215 SMART serkin_6 916 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1095 1215 Pfam Protein kinase domain 918 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1095 1215 SUPERFAMILY RNI-like 330 626 - -
Lan4g1095 1215 SUPERFAMILY L domain-like 688 818 - -
Lan4g1095 1215 Pfam Leucine rich repeat 563 618 IPR001611 GO:0005515
Lan4g1095 1215 Pfam Leucine rich repeat 723 782 IPR001611 GO:0005515
Lan4g1095 1215 Pfam Leucine rich repeat 285 347 IPR001611 GO:0005515
Lan4g1095 1215 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
Lan4g1095 1215 Gene3D Phosphorylase Kinase; domain 1 879 991 - -
Lan4g1095 1215 SMART LRR_typ_2 334 358 IPR003591 -
Lan4g1095 1215 SMART LRR_typ_2 745 768 IPR003591 -
Lan4g1095 1215 SMART LRR_typ_2 508 532 IPR003591 -
Lan4g1095 1215 SMART LRR_typ_2 721 744 IPR003591 -
Lan4g1095 1215 SMART LRR_typ_2 284 309 IPR003591 -
Lan4g1095 1215 SMART LRR_typ_2 769 792 IPR003591 -
Lan4g1095 1215 SMART LRR_typ_2 581 605 IPR003591 -
Lan4g1095 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 121 - -
Lan4g1095 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 184 1201 - -
Lan4g1095 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 129 255 - -
Lan4g1095 1215 SUPERFAMILY L domain-like 44 352 - -
Lan4g1095 1215 ProSiteProfiles Protein kinase domain profile. 916 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1095 1215 Gene3D Ribonuclease Inhibitor 35 174 IPR032675 -
Lan4g1095 1215 Gene3D - 638 695 - -
Lan4g1095 1215 Pfam Brassinosteroid receptor island domain 631 694 IPR045381 -
Lan4g1095 1215 Gene3D Transferase(Phosphotransferase) domain 1 992 1207 - -
Lan4g1095 1215 SUPERFAMILY Protein kinase-like (PK-like) 899 1190 IPR011009 -
Lan4g1095 1215 Gene3D Ribonuclease Inhibitor 186 815 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1095 Lan-Chr4 16457820 16462284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1095 4 1214 Receptor kinase-like Gene Family AT1G55610 61.526 0.0 1481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lan4g1095 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1095 - - cit:102619977 1707.58