Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1085 ATGGCAAGGTGTTTCCCTACTTTCTTGTTTCTCTCTATCATATCTATTGCAGCCATATCCAATTTCACAGCTGCAACACCTTCCAATTTCATCAAATCCTCTTGCAGCACCACCACATACCCATCACTTTGTGTTGAATCTCTTTCCATCTATGCCACCACAATTCAACAAGACCCTCACCAACTAGTTCAAACAGCCTTATCAGTTAGCCTCAACAACACTCAATCTACAAAGACATTTGTGTCAAAGTGCTACAAATTGAGGGGTCTAAAGCCAACAGAATATGCTGCACTTCATGATTGTGCTGAAGAAATTAGTGACAGTGTTGATAGACTAAGCAAATCAATCAAGGAACTTAAGCTGTGTAAGGTTAAGGGTGAGGACTTTAGATGGCACATAAGTAATGTTGAGACATGGGTCAGTTCTGCTTTGACTGATGAAACTACTTGTGGTGATGGGTTTAGTGGAAATGCAATTAATGGGAAAATTAAGGATTCTATTAGAGCTAGAATGGTTAATGTTGCTCATGTTACTAGTAATGCTCTTTCACTTATTAATCAGTATGCTGAAAAGTACTAG 579 0.3869 MARCFPTFLFLSIISIAAISNFTAATPSNFIKSSCSTTTYPSLCVESLSIYATTIQQDPHQLVQTALSVSLNNTQSTKTFVSKCYKLRGLKPTEYAALHDCAEEISDSVDRLSKSIKELKLCKVKGEDFRWHISNVETWVSSALTDETTCGDGFSGNAINGKIKDSIRARMVNVAHVTSNALSLINQYAEKY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1085 192 Pfam Plant invertase/pectin methylesterase inhibitor 29 184 IPR006501 GO:0004857
Lan4g1085 192 CDD PMEI-like_3 33 189 - -
Lan4g1085 192 SMART PMEI_2 26 184 IPR006501 GO:0004857
Lan4g1085 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 188 IPR006501 GO:0004857
Lan4g1085 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 191 - -
Lan4g1085 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 188 IPR035513 -
Lan4g1085 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 191 - -
Lan4g1085 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1085 Lan-Chr4 16151500 16152142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1085 31 185 Carbohydrate Esterase AT3G14310 31.410 2.53e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1085 - - gmx:100305900 290.426