Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1068 ATGGCCGACACCATTAACGTCCCCTCTGATTCCCTACCCCAATCTCCCTCTCCCTCCGCCGTCAATGACGATCTCCCTCCGCCACCTCATCCTCCGCCTATCCACCCATCCAGGCGGAGGGACCGCCGTGACGACTACCGCCGTGATTATCATGACCGCAACTTGTCCCCCAGGGACCACCGCGGCAGGGACTTCAAGCGCCACCGCAGCCCTAGCCCTAACTACCGTGACCGCCGCTATTCTCCTCCCCCGCCTTCACGGCGCTCCCCTCCTCAGTTTAAGCGCCACAGGAGGGGAAGCCCCCGTGGCGGCGGTTATGGCCATGATGACAGATCTGGCTATGATTATGCTGGTGGCTATGAACGGGGAGGCGGTGGAAGGGGTGGAGAGAGGTCTTATGGTGGAAGGTTTGGACATCGACCTGCTGGACGATATCAAAATGGAATTTCTGATGTCAATCGCAGTTATGCTGGCTTGCCAGGTGGTGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAATTCATCCAGGAGCTTGAGGATGATATTCTGCCATCTGAAGCTGAGTGCAGGTATCAAGAGTACAAATCAGAGTATATTTCTACTCAAAAGCGAGCTTACTTTAATGCTCATAAGAATGAGGAGTGGTTGAAAGATAAATATCACCCGACAAATTTACTGACAGTAATTGAAAGGAGGAATGAAAATGCTCGAAGGCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACGTTAGACCTAAATCCTGGTTTAAACACCTCTTCATCCAACAAATCAGGGCATGTAAGCGAGCCACATTCAGAGGAGGAAACAGATGCTGGTCTTAAACGAAGAAGACATCCAAGGGAACCTAATAAAGATAGTGATTTCCTAGCTGCTCCAAAGGCTCACCCTATTAGTTCTGAACCTAAACGCATACGACAGGATATTCAACAAGCTCAGGCTGTAGTTCGTAAGCTTGACATGGAGAAGGGAATTGAAGATAATATTTTATGCACGAGTGATCACACAAAAAATGATGATAAGGCTCGCAGTGGATCCGTGGGCCCCACAGTAATTATACGGGGTTTAACATCTGTTAAGGGCTTAGAGGGTGTTGAGCTACTTGACACACTTATTACTTATCTCTGGCGGGTTCATGGTGTAGATTATTATGGCACGATTGAGACTAATGAGGCTAAGGGTTTTAGGCATGTGAGACCAGAAGGAGCTGGGCATGAAGAAAAAGGTAAATCAGGGTCTGAATGGGAGAAGAAAGTTGATTCGTTTTGGCAGGAAAGGTTGAATGGCCAGGATCCTTTGGAAGTTAGGACTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGAATTCTTGGATGCATATGTGCGAAAAATTAGGGATGAAAAGTATGGGTGGAAGTATGGTTGTGGGGCTAAAGGCTGCACAAAGCTTTTTCATGCTACTGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGAGCTTGTCACTGATCTGACTTCAAAATTGAGCGAGGATCTTTATTTCCAAAATTACATGAATGATTCAGATGCACCCGGAGGAACGCCTGTCATGCAGCAACCTCAGAGGGTCAAGTCTCTTAAGCAAAGGTTAGGAGGTCTGGATGGCCGATTAAAAGATGATCGTGGTAGTCGGCGAGATCATGATAGGAGTGACAGAATAAATGGAGATAGGCCTGACAATTCCCCATCCAGTGAGAGGCAGTTGGGAAACCATGATGAAGAAATGTATGATGCTTATGGTGGGCCTGCTGTACCTCAATTTACCTCAGATATGCCCCCTCCTCCCCAAGTTTTGATGCCTGTACCTGGGGCTGGGCCATTGGGACCTTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAGCAAGGAGGCCCACCTTCATATGATGCTCCTGGTAGGAAGATGCGTTCTGGTCCTGGTCCTCATGTGGGTGGGTCAGCGCCAATAATTGCTGTTCCTCCCGCTTTTAGAGCAGATCCTCGACGACTGCGCAGTTATCAAGATCTGGATGCCCCAGACGACGAAGTCACCGTGATAGATTATCGGAGCTTGTAG 2112 0.4825 MADTINVPSDSLPQSPSPSAVNDDLPPPPHPPPIHPSRRRDRRDDYRRDYHDRNLSPRDHRGRDFKRHRSPSPNYRDRRYSPPPPSRRSPPQFKRHRRGSPRGGGYGHDDRSGYDYAGGYERGGGGRGGERSYGGRFGHRPAGRYQNGISDVNRSYAGLPGGGAQREGLMSYKQFIQELEDDILPSEAECRYQEYKSEYISTQKRAYFNAHKNEEWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDLNPGLNTSSSNKSGHVSEPHSEEETDAGLKRRRHPREPNKDSDFLAAPKAHPISSEPKRIRQDIQQAQAVVRKLDMEKGIEDNILCTSDHTKNDDKARSGSVGPTVIIRGLTSVKGLEGVELLDTLITYLWRVHGVDYYGTIETNEAKGFRHVRPEGAGHEEKGKSGSEWEKKVDSFWQERLNGQDPLEVRTAKEKIDAAAVEFLDAYVRKIRDEKYGWKYGCGAKGCTKLFHATEFVHKHLKLKHPELVTDLTSKLSEDLYFQNYMNDSDAPGGTPVMQQPQRVKSLKQRLGGLDGRLKDDRGSRRDHDRSDRINGDRPDNSPSSERQLGNHDEEMYDAYGGPAVPQFTSDMPPPPQVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPPSYDAPGRKMRSGPGPHVGGSAPIIAVPPAFRADPRRLRSYQDLDAPDDEVTVIDYRSL* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1068 703 MobiDBLite consensus disorder prediction 545 575 - -
Lan4g1068 703 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 703 - -
Lan4g1068 703 MobiDBLite consensus disorder prediction 522 585 - -
Lan4g1068 703 MobiDBLite consensus disorder prediction 1 133 - -
Lan4g1068 703 MobiDBLite consensus disorder prediction 255 316 - -
Lan4g1068 703 MobiDBLite consensus disorder prediction 522 541 - -
Lan4g1068 703 MobiDBLite consensus disorder prediction 270 298 - -
Lan4g1068 703 MobiDBLite consensus disorder prediction 255 269 - -
Lan4g1068 703 MobiDBLite consensus disorder prediction 1 19 - -
Lan4g1068 703 Pfam Arsenite-resistance protein 2 421 598 IPR007042 -
Lan4g1068 703 Pfam SERRATE/Ars2, N-terminal domain 173 255 IPR021933 -
Lan4g1068 703 MobiDBLite consensus disorder prediction 640 667 - -
Lan4g1068 703 ProSitePatterns Zinc finger C2H2 type domain signature. 477 500 IPR013087 -
Lan4g1068 703 MobiDBLite consensus disorder prediction 34 75 - -
Lan4g1068 703 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 703 IPR039727 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1068 Lan-Chr4 15766032 15773251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1068 75 703 C2H2 Transcription Factor Family AT2G27100 60.752 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1068 - - gmx:100817569 983.786