Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1065 ATGGAATCTATTAGGCCACTTTTGTTACAATCTCCAAGAACTCCAAATACACAAGAGTTTGTTCCTGCTATGCATGTTTTTCCTGAACTACCTAAATCAAAGTCAAGTTCTAGCAACACTGTAACCTTTGCTGAGATTGATTCAAGCAACCCAATTGAGAATTCTTCAAATTCTGAAGCCTCATGGAGCCTGAAGAAATCGTCGTCGAGGAGAAGTAATACATCAGTTCACTCTGGGAGCTCTGGTAGTACTAAGAACTCTGTGAAGGAAGTTAGTCGTTCTGGATCGAACTCTGTGAAGGAAGTTAGTCGTTCTGGATCGAAGTCTGTAAGGTATGGCTCACAGGGTGCTGATTCTGATGGACTGAGCATGTCTCAGAAGGAACTAAGTGATGAGGATGCAAGATTGGTTTATGTAAATGATCCTGACAGGACTAATGAGAGGTTTGAATTTTCGGGAAATTCGATTCGTACCACTAAATACTCTATCCTCACTTTTATCCCAAGGAATCTGTTTGAACAATTCCATAGAGTTGCTTATATTTATTTTCTTATCATTGCTATCCTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGAGGGGTTGTTTCTGTTTTGCCATTGGCCTTTGTCCTTATTGTTACAGCTGTGAAGGATGCTTACGAGGATTGGAGGCGGCATCGAGCAGATAAAGTCGAAAACAACAGGTTAGCATCAGTTTCGGTTAATGGTGAATTGATAGAGAAGAAATGGAAGGATATAAGAGTTGGTGAGATCATAAAAATCAAAGCAAATGAAAGCATTCCTTGTGATATTGTGTTGCTTTCAACTAGTGATCCAACTGGAGTAGCATATGTTCAAACTATTAACCTTGATGGTGAGTCGAACTTGAAGACTAGGTATGCGAAACAAGAGACACATTCCGAAAAGGGTAGATTCAATGGTTTAATCAAGTGTGAGAAACCAAATAGGAACATATATGGATTTCAAGCTAACATGGAAATTGATGGTAAGAGATTGTCACTAGGTTCCTCTAATATTGTGCTTAGAGGCTGTGAAGTTAAGAATACTAGTTGGGCACTTGGTGTTGCTGTATATTGTGGTGGTGAGACCAAAGCTATGCTCAACAGCTCAGGTGCTCCATCGAAGAGAAGCCGGCTCGAGACTCGAATGAACTCCGAGATCATAATGCTCTCATTCTTTCTTATTGCTTTGTGTACTGTCACCTCAGTTTGCGCAGCCGTTTGGTTGAAGCGGCACAAGGACGAGTTGGATCTCTTGCCTTATTACCGGAAACTGGATTTTTCAGAGGGGAAAGAAGAGAGCTATAAATATTATGGATGGGGATTTGAAGTTCTTTTCACATTCCTCATGTCGGTTATAGTGTTCCAGGTCATGATTCCAATATCCTTGTACATTTCTATGGAGCTTGTTCGCGTCGGTCAGGCCTACTTCATGATTGGTGACAACAATATGTATGATGAGGCAACAAAATCAAGATTTCAGTGCAGGGCTTTAAACATTAATGAAGATTTGGGGCAGATTAAGTATGTCTTTTCCGACAAAACCGGTACACTTACTGAGAACAAGATGGAGTTTCGATGTTCAAGCATCTATGGAGTTGATTATAGTTCTACAAAAGCCATATTGGAAGATGAGAAAGTTGAATATTCTGTAGTAGATGGAAAGGTCTTGAGACCTAAGATGCAGGTTAAAGTTAATCCAGAGCTTTTTCAATTATCAAGAAGTGGACTCGAAAATACGGACGGAAAACAGATTCATGATTTCTTTCTAGCACTGGCTGCCTGCAATACTATTGTGCCTCTTGTTGTTGACACATCTGATCCTGATGTCAAGCTGATAGATTACCAAGGGGAGTCACCAGATGAACAAGCATTAGCTTATGCCGCTGCTGCCTACGGTTTTACGCTTATAGAACGAACCTCGGGTCATATAATCATTGATATTCAAGGAGAAAGACAAAGGTTCAATGTCTTAGGTATGCATGAATTCGATAGTGATCGGAAGAGGATGTCAGTTATATTGGGCTACCCAGACAATTCTGTGAAACTTTTTGTTAAAGGGGCAGATACATCAATGCTTAGTGTGAAGGATAAATCATTTGACATGAACATAATAAGAGAAACCGAAACCCATCTTCACTCTTATTCTACACAGGGTTTGAGAACACTTGTTATCGGAATACGAGAATTGAATACTTCAGAATTTGAGCAATGGCATGCTGCCTTCGAGACAGCAAGCGCTGCTTTGTTTGGTAGGGGCGCGACGCTTCGCAAGGTTGCTAGCAACATAGAGAGAAATATCTGCATATTAGGTGCAACTGCTATTGAAGATAAGCTGCAGCAAGGTGTGCCCGAAGCCATCGAGTCTCTGCGGACGGCGGGAATTAAAGTATGGGTGTTAACTGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCCTCAAAGCTCCTAACAAGAAACATGACTCAAATTACAATTAATAGCAACAATAAAGAGTCAAGTAGAAGGAAGTTGAAAGATGCCATTGTCATGACTCAAAAACTCGCGTCTACATCCGAAGGAAGTTCCGATTCACTTCCAACTCTGGTAGCCTTGGTTATTGATGGTACTAGCCTTGTACATATCCTTGACAGTAAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGATGTTCTGTTGTTCTATGTTGTCGGGTGGCGCCATTGCAGAAGGCTGGGATTGTTTCCCTTGTTAAGAAGAGAACTTCAGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGAGTTGGAATCAGTGGACAAGAGGGTAGACAAGCTGTAATGGCATCAGATTTTGCAATGGGACAGTTTAGGTTCTTAGTTCCTCTCTTATTGATACATGGTCACTGGAATTACCAAAGACTTGGTTACATGATACTATACAACTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTTCTCTTCACTGCCTTCACTTCAACAACTGCTATAAATGAATGGAGCAGTACATTATATTCAATAATCTACACTTCATTACCAACTATTGTTGTTGGTATTCTAGACAAAGATCTCAGTAAAAGAACTCTCTTAAAGCACCCTCAGCTCTATGGTGCTGGCCAAAGACATGAAGCCTATAACAAAAGATTATTTTTGTTCACAATGGTTGATACTTTATGGCAAAGTTTGGTTATATTTTGGGTTCCCCTCTTTGCATATTGGAGTAGCACTATTGATATATCAAGTATTGGAGATCTTTGGACTCTTGCAGTGGTTATTTTGGTTAATTTACACTTAGCCATGGATGTTGGAAGATGGAGTTGGGTTACTCATGTTTCCATTTGGGGTTCCATAGTTGCAACTTTCCTTTGTGTCATGATAATAGATGCTATACCTTCATTGTTTGGTTACTGGGCTTTCTTTCATGCTGGAGGCACTGCATTGTTCTGGTTATGTTTGCTCGGAATCATGATAGCAGCATTGCTTCCTCGATTCGCAGTTAAGTTTGTTTACCAATACTATTTTCCGACCGATATTCAAATTTCAAGAGAAGCTGAGAAAGTTGGGATTGAAAGAGAAGTTGAAGGTGGTGGACAGATAGAAATGCTTCCTATATCAGATGGTCCATCAAGATGA 3699 0.4031 MESIRPLLLQSPRTPNTQEFVPAMHVFPELPKSKSSSSNTVTFAEIDSSNPIENSSNSEASWSLKKSSSRRSNTSVHSGSSGSTKNSVKEVSRSGSNSVKEVSRSGSKSVRYGSQGADSDGLSMSQKELSDEDARLVYVNDPDRTNERFEFSGNSIRTTKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGGVVSVLPLAFVLIVTAVKDAYEDWRRHRADKVENNRLASVSVNGELIEKKWKDIRVGEIIKIKANESIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHSEKGRFNGLIKCEKPNRNIYGFQANMEIDGKRLSLGSSNIVLRGCEVKNTSWALGVAVYCGGETKAMLNSSGAPSKRSRLETRMNSEIIMLSFFLIALCTVTSVCAAVWLKRHKDELDLLPYYRKLDFSEGKEESYKYYGWGFEVLFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDNNMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCSSIYGVDYSSTKAILEDEKVEYSVVDGKVLRPKMQVKVNPELFQLSRSGLENTDGKQIHDFFLALAACNTIVPLVVDTSDPDVKLIDYQGESPDEQALAYAAAAYGFTLIERTSGHIIIDIQGERQRFNVLGMHEFDSDRKRMSVILGYPDNSVKLFVKGADTSMLSVKDKSFDMNIIRETETHLHSYSTQGLRTLVIGIRELNTSEFEQWHAAFETASAALFGRGATLRKVASNIERNICILGATAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTRNMTQITINSNNKESSRRKLKDAIVMTQKLASTSEGSSDSLPTLVALVIDGTSLVHILDSKLEEQLFQLASRCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTSTTAINEWSSTLYSIIYTSLPTIVVGILDKDLSKRTLLKHPQLYGAGQRHEAYNKRLFLFTMVDTLWQSLVIFWVPLFAYWSSTIDISSIGDLWTLAVVILVNLHLAMDVGRWSWVTHVSIWGSIVATFLCVMIIDAIPSLFGYWAFFHAGGTALFWLCLLGIMIAALLPRFAVKFVYQYYFPTDIQISREAEKVGIEREVEGGGQIEMLPISDGPSR* 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1065 1232 Pfam Cation transport ATPase (P-type) 625 700 - -
Lan4g1065 1232 Gene3D - 621 753 IPR023299 GO:0000166
Lan4g1065 1232 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 524 788 IPR023299 GO:0000166
Lan4g1065 1232 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 10 1232 - -
Lan4g1065 1232 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 151 1205 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan4g1065 1232 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 450 560 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan4g1065 1232 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 901 1018 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan4g1065 1232 MobiDBLite consensus disorder prediction 1 129 - -
Lan4g1065 1232 SFLD p-type atpase 502 981 IPR044492 -
Lan4g1065 1232 Pfam Phospholipid-translocating ATPase N-terminal 137 202 IPR032631 -
Lan4g1065 1232 Pfam Phospholipid-translocating P-type ATPase C-terminal 958 1198 IPR032630 -
Lan4g1065 1232 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 1197 IPR023298 -
Lan4g1065 1232 Gene3D - 207 375 - -
Lan4g1065 1232 CDD P-type_ATPase_APLT_Dnf-like 153 1090 - -
Lan4g1065 1232 SUPERFAMILY Calcium ATPase, transduction domain A 234 372 IPR008250 -
Lan4g1065 1232 PRINTS P-type cation-transporting ATPase superfamily signature 518 532 - -
Lan4g1065 1232 PRINTS P-type cation-transporting ATPase superfamily signature 800 810 - -
Lan4g1065 1232 PRINTS P-type cation-transporting ATPase superfamily signature 917 929 - -
Lan4g1065 1232 MobiDBLite consensus disorder prediction 31 124 - -
Lan4g1065 1232 SFLD Haloacid Dehalogenase 502 981 - -
Lan4g1065 1232 Gene3D - 773 970 IPR023214 -
Lan4g1065 1232 SUPERFAMILY HAD-like 505 971 IPR036412 -
Lan4g1065 1232 Pfam E1-E2 ATPase 237 475 - -
Lan4g1065 1232 ProSitePatterns E1-E2 ATPases phosphorylation site. 520 526 IPR018303 -
Lan4g1065 1232 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 10 1232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1065 Lan-Chr4 15683121 15688786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1065 106 1232 Primary Pumps ATPases AT5G04930 70.635 0.0 1705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1065 K14802 - gmx:100813982 1876.68