Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1055 ATGGAGGTTTCCAACGACGATTTCATGGAGGTGGAGATTGGAAGCTCCATGGAGTCGTTGCAGAACTTTTTGGCTTCGCAGAGAGATCTATTCCATAGTCAGATCGATCAGTTTCAACAAATTGTTGTCACACAATGCAAACTCACCGGTGTTAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTTTATCAATAAAGATTGGAAAAAGACCTAGGGATTTATTAAACCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCTATTAAAGATGCCATTAGCAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGTATCACGGTGAAACAGGTGCGTGACTTTTTTGCTAGTCAACGCTCAAGAGTAAGGAGACTAGTTCAGTTGTCAAGAGAGAGGGCGTTAATATCTAATTCTTGTGAAGAATCTCATGATGGACAAGTAAACTCTGATCCTATGAGACCAATAAATCCAGTTCCCTTGAACTCTGCTGGTCCCATCAATGCTGAGGAAGCATCTTGTTCAACACAAGAAACTACTTTGTCTGGTCTAGATGACTTAGATAAACAGTTTGTTGATAACATTTTTAGTCTAATGCAGAAAGAGGAAACATTTTCTGGGCAGGAGAAATTGATGGAGTGGATATTAACTGTGCAAAATTTTGTAGTATTGTTGTGGTTTTTGACCAGAGGTGGTGTTATGATTTTAGCAACTTGGATGAGTACAGCAGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTATCTTAAAGGTTCTTTGTCATTTGCCTTTACATAAAACCCCTCCTGCACAAATATCAGCTATATTGCAGAGTGTTAATAGACTGCGGTTCTACAGAACTTCAGACATATCGAACAGGGCAAGGGTTTTGTTAGCAAAGTGGAGCAAATTACTAGCAAGGAACCAAGCAATGAAGAAACCTAATGGTGTTAATTCTTTTAGGGATAGTAAAAGAGAGACAATGCTTTCTCATAGTATTGGTCAAATTATGGGATCTGAGTCATGGCATTCAAATATTGATGTTCCTGAAGATATTCTTGGTCTCTCAAATGAATGTTCCGATAATCTCAGGAAAATGGAACCACTGCCAGTTTTGAAATTGTTGCCACCTTGCTCGGATGATTCAAATAAGAAGCCTGGCCTTGGTTTATCTTCATCGCAATCTCGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGTCAAAAAACAGCAAGCAGAAGCCCACAGGCAGCAACAACAAGGCCTGTTACTCAAGGCCGTCCTGTGTCTGTTGATGATATCCAGAAAGCAAAAATGCGTGCACTATTTATGCAGAGTAAGTATGGGAAAGCTGGTCCTGCAAAAGAAAGTAAAGGAGCAAAGATTAATGGTCTGACTAAACCTCAGACAAATCAGGCAAGTATTTCAGCTTGCTCTTCTAAAGTTCCTCTTCCACTCAAAATTGAAGAAGACAAGAAATCTCCACTGCTTCCCTCCAAAATCACTAATAGGTCGGAAGCTTCTTATTCTAACCTGAAAATGGATTTGAAGGAACCTCTCTGGGAGAAGTGCAAGAGGGTGCAAATCCCATGGAAGACTCCAGCAGAAATGATAATTGATGGTAGCTGGAGAATTGGTGCTGGTCAAAATAGCAAAGAGGTTGATGTGGAGAAAAACAGAAACTGCAGGGATAAGGAAACTATCTACCATTCTATCCAAGAGATGCCATCTAATCCCAAGGAACCATGGGACATTGAAATGGACTATGATGACACTTTGACACCAGAGATTCCTATTGAACAACTACCAGATGATGATGGTGATGATGCCGAGATAGAAGTTGACCCTAATCATGTTGAAATTCATGCTGTTCAAGAGGTGGCTACCACATCTTCAAATGATAATAATAATGCAGTTACTGCTGAACCTGATTTAGAGCTTCTTGCTGTGCTTCTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGCTGGTAGCATAACAAATGAGGATACAGTGAAGTTGCTAGACATGATCAAGAGTGGTGGGTTGAACTTGGGGGGTTTATGTGAAAATAACGCAGCAAATACAAATGGTAACTATGGCATTAGCGCAAGGGCCCCAGAGACGGTGGAAGTTTCTCTCCCGTCCCCAACTCCTTCAAGTGATCCAAGAACGAGTGGATGGAGCACAGAAGCATCATCAAAGAATCCATTTTCACGGCAAAGCTTACCAACTGATAGAATTATCCACAACTCCTCCACTGTGGTAACTACCAACTTATTATCTCAGATTCCGGCTGCTGACAATATAGTAAGGCAACAGCCGCCAACGGTTGCGCTACAATCATCGAAGCAGATTACCGGTGCTGCAGTTTCACGCTATCCACTGCCTCAGGCAACCAATATTTTTCCTGAAAGGCAACCACCACATGCTCTTTCCTCTATGCATGTACAAACACCATCGCCGGAAATAGGTTTAACAACCATGAAGAAGAACATAATCAGTGCAAATACATCTTCAGCTAACTTACCTGGTGCACATTCACCACTAGCAATGCGAGTTGATGGCACTAGTAATGTAAGACCAGTACCTAAATTGAGTGTACAAGAGGGTGTATCTAATTCATTCCCACAATACTCCATGTTGACCTCACAAACACCAACACCATCACTTTCAGCCACACAGCAACATAGACACACTGCACATTTGATGCAACAACAACAACAGGCCCATTTCTCTGAACCTTCATACCATAGTAACACTGTACCTTCATATCCACCACAAATTGAAAAACCAGGTCCAGTTTCAGATGCATGGAGAGTTAGGCAAAATGATATGCCATCAAGTTATCATCAATCTGAAAGAAACCAAAACAACTATAACAACACATTGGTTGGGAGATCCATGCAATCTGGTTCTTCATGGGATAGAAATAATCATGGTAGTAGTAGTAGTAGTAGGGAAGGATTTGAAACATGGAGCCCAGAGAATAGTCCAACTAGAAATCCTACGCATGTTCCTGGTAGAAATTTCAATGAGTCAAGAATGAATGATAATCATGGAAGAAATGTAAGACCTGAATGGTCAAGGCAACAAAGGGGTTCTTCTGGATATTGGGACCCTGCTAGGCAGGGGAACAAAAAGTGGAATGATCAGAGAAGATGA 3177 0.4117 MEVSNDDFMEVEIGSSMESLQNFLASQRDLFHSQIDQFQQIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGITVKQVRDFFASQRSRVRRLVQLSRERALISNSCEESHDGQVNSDPMRPINPVPLNSAGPINAEEASCSTQETTLSGLDDLDKQFVDNIFSLMQKEETFSGQEKLMEWILTVQNFVVLLWFLTRGGVMILATWMSTAAVEEQTSVLLLILKVLCHLPLHKTPPAQISAILQSVNRLRFYRTSDISNRARVLLAKWSKLLARNQAMKKPNGVNSFRDSKRETMLSHSIGQIMGSESWHSNIDVPEDILGLSNECSDNLRKMEPLPVLKLLPPCSDDSNKKPGLGLSSSQSRERRKVQLVEQPGQKTASRSPQAATTRPVTQGRPVSVDDIQKAKMRALFMQSKYGKAGPAKESKGAKINGLTKPQTNQASISACSSKVPLPLKIEEDKKSPLLPSKITNRSEASYSNLKMDLKEPLWEKCKRVQIPWKTPAEMIIDGSWRIGAGQNSKEVDVEKNRNCRDKETIYHSIQEMPSNPKEPWDIEMDYDDTLTPEIPIEQLPDDDGDDAEIEVDPNHVEIHAVQEVATTSSNDNNNAVTAEPDLELLAVLLKNPELVFALTSGQAGSITNEDTVKLLDMIKSGGLNLGGLCENNAANTNGNYGISARAPETVEVSLPSPTPSSDPRTSGWSTEASSKNPFSRQSLPTDRIIHNSSTVVTTNLLSQIPAADNIVRQQPPTVALQSSKQITGAAVSRYPLPQATNIFPERQPPHALSSMHVQTPSPEIGLTTMKKNIISANTSSANLPGAHSPLAMRVDGTSNVRPVPKLSVQEGVSNSFPQYSMLTSQTPTPSLSATQQHRHTAHLMQQQQQAHFSEPSYHSNTVPSYPPQIEKPGPVSDAWRVRQNDMPSSYHQSERNQNNYNNTLVGRSMQSGSSWDRNNHGSSSSSREGFETWSPENSPTRNPTHVPGRNFNESRMNDNHGRNVRPEWSRQQRGSSGYWDPARQGNKKWNDQRR* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1055 1058 MobiDBLite consensus disorder prediction 715 748 - -
Lan4g1055 1058 MobiDBLite consensus disorder prediction 375 431 - -
Lan4g1055 1058 MobiDBLite consensus disorder prediction 406 427 - -
Lan4g1055 1058 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Lan4g1055 1058 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 1058 - -
Lan4g1055 1058 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Lan4g1055 1058 MobiDBLite consensus disorder prediction 946 1018 - -
Lan4g1055 1058 MobiDBLite consensus disorder prediction 882 1058 - -
Lan4g1055 1058 MobiDBLite consensus disorder prediction 882 930 - -
Lan4g1055 1058 MobiDBLite consensus disorder prediction 717 748 - -
Lan4g1055 1058 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 1058 - -
Lan4g1055 1058 SMART HOX_1 68 130 IPR001356 GO:0003677
Lan4g1055 1058 CDD homeodomain 69 125 IPR001356 GO:0003677
Lan4g1055 1058 Gene3D - 66 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1055 Lan-Chr4 15382336 15392289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1055 481 745 Homeobox Transcription Factor Family AT4G02560 43.774 3.20e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1055 - - gmx:100780237 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1055 4 15382336 15392289 Lan16g0895 16 15758619 15769017 LSH