Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1024 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGACCAGTGGCCCTCCGGCCAGCCAATATACTGCACCATCTAGAGGGGGTGGTACATATGGCGGAGGAGGAGGCAATGACAGAGCAGAGCCAAGAAGCAATATTGTCAAAAGTGGTGGCCCACAGAAAGTATTACCAATTGAAATACCAGCTATGCCATTGGATGAGTTAAATAGGTTAACAGGAAGCTTTGGTACTAAGGCTTTCATTGGAGAAGGTTCCTATGGAAGGGTTTTCTATGCAAAATTGAGTGATGGTACTGATGCTGCAATCAAGAAGCTGGATAATTCTTCCCCGGAACCCGATGACGATTTTGCTAATCAGCTATCAGTTGTTTCAAGACTGAAACATGAAAATTTTGTGGAGTTGTTTGGATATTGTCTTGAGGCAAACAACAGAATTTTGGTTTATCAATATGCAAGTATGGGATCTTTGCATGATGTGTTACACGGAAGGAAGGGTGTACAAGGTGCTGAACCAGGTCCTGTTTTAAGCTGGAACCAGAGAGCAAAAGTTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGGCTCAGCCTTCTATAGTTCATCGCGATGTTAGATCCAGCAATGTCTTGTTGTTCAATGATTATGAGGCCAAGATTGCTGATTTCAGCCTCACAAATCAGTCTTCTGACACAGCAGCTAGGCTACACTCAACAAGAGTCTTAGGAACATTTGGTTATCATGCTCCAGAGTATGCCATGACTGGACAAATAACCCAGAAAAGTGATGTATACAGTTTTGGTGTTGTACTTTTAGAACTCTTAACAGGAAGAAAACCAGTAGATCACACAATGCCCAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGATTACCCTCCAAAGGCAATTGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAATATGAAGCTGATTTCCGACCAAATATGACCATTGTTGTCAAAGCTCTCCAACCACTTCTCAATGCAAAACCTCCAGGTCCTGCTGATTCCAATGCTTGA 1101 0.4323 MLCCGGAEEETSGPPASQYTAPSRGGGTYGGGGGNDRAEPRSNIVKSGGPQKVLPIEIPAMPLDELNRLTGSFGTKAFIGEGSYGRVFYAKLSDGTDAAIKKLDNSSPEPDDDFANQLSVVSRLKHENFVELFGYCLEANNRILVYQYASMGSLHDVLHGRKGVQGAEPGPVLSWNQRAKVAFGAAKGLEFLHEKAQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPPGPADSNA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1024 366 PANTHER OS03G0226300 PROTEIN 1 362 - -
Lan4g1024 366 SUPERFAMILY Protein kinase-like (PK-like) 52 350 IPR011009 -
Lan4g1024 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Lan4g1024 366 ProSiteProfiles Protein kinase domain profile. 73 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1024 366 MobiDBLite consensus disorder prediction 1 50 - -
Lan4g1024 366 Pfam Protein tyrosine and serine/threonine kinase 77 350 IPR001245 GO:0004672|GO:0006468
Lan4g1024 366 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Lan4g1024 366 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Lan4g1024 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 362 - -
Lan4g1024 366 SMART tyrkin_6 73 350 IPR020635 GO:0004713|GO:0006468
Lan4g1024 366 Gene3D Transferase(Phosphotransferase) domain 1 150 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1024 Lan-Chr4 14524281 14528829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1024 37 357 Receptor kinase-like Gene Family AT3G58690 42.462 3.44e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lan4g1024 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1024 - - gmx:100786291 656.366