Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1013 ATGGCAGAAACTGCAGTATTATTTGTTATAGATCAAGTGTACAAACTCCTACTAGAAGAGTTTACTTTTCTAGCAAGGATTCACAAAGAGTTTGCACACATCAAAGATGAACTAGAAAGTATTGGAGCATTCCTCAAAGATGCAGATACAAGGGCTATAGGTGATGGTGACACTAGTGAAGGAATAAAAGTTTGGGTGAAGCAACTGAGAGAGGTTTCATTTCGTATCGAAGATGTCATCGATGAGTACATTTATCTGGCACAAAGGGTCCATCATCCGGGATGTATAGCTTCATTCCGAAAGATTGGTCACCTAGTCAAAAGTTTGAAGGCTCGTCATCGAATAATGTCTGAGATCGAAGACATTAATTTATCGATCCGTGGAATCAAAGAACGAAGCGAAAGGTATAACTTTCAGTCTTTACATGAACAAGGAGGATCAACAGGGACAAAAGTTGACAAATGGCATGATCATCGATTGTCTTCAATTTTCATCGAAGAGTCAGAAGTCGTTGGATTCGAATCTCCGAGAGATGAATTGGTTGGTTGGTTATTGGAAGGAGCAGCCGAGCGCACAGCTATTTCAGTTGTAGGAATGGGGGGACTCGGAAAAACAACTCTGGCCAAGCTAGTTTTTGACAGCCAGAATGTTACAGGGCACTTTGATTGTTGTGCTTTCATCATAGTTTCTCAATCATACACCATAAGGGGATTATTGATAGAAATGATAGAGCAATTTTGTAAAGAGACATTGGAGCCTCTTCCTCAGAATATGCATAAGATGGATGAGAAAACACTGATAACAGAAGTGAGGCAATACCTTCAGCAAAAGAGGTACTTAGTATTCTTTGATGATGTGTGGAAACTGGATTTTTCTGATGAGATTGAACTTGCCATGCCTAATAATAACAAAGGAAGTAGGATCATTATTACTACTAGAATGATGCATGTTGCTGAGTTTTTTAAGAAAGCTTTTCCGGTTCGTGTTCAAAGCTTACAACTTTTGCCTCCAAACAAAGCTTGGGAACTCTTCTGCAAAAAGACATTTCGATACGAGATTGACCAGAATTGTCCATTAGAGCTCATGGATATGTCTAATGAAATTGTTCAAAAATGCAAGGGGCTGCCACTAGCAATTGTGGCCATCGGCGGTCTTTTGTCAACAAAAGCTAAAACCATGATTGAATGGAAAAAGCTGACTCGGAATCTGAGTCTAGAATTAGAGTGTAATGCCCATTTAACCAATTTAACAAAGATTTTATCTCTAAGTTTTGATGACCTTCCTTACTATTTGAAAGCATGTATGTTGTATTTTGGTGTATATCCGGAGAACAATTCCATTAGTACTGGGAGATTGACAAGACAATGGATAGCCGAAGGATTTGTTAAAAATGAGGGGAAAAGAACTTTAGAGGAAGTTGCCAAAGAATACTTGACAGAGTTAATACATCGAAGCTTGGTTCAAGTCTCAAAACTAGGATGCGACGGGAAAATTAAAAGATGCCAAGTCCATGGTTTATTACGCGAAGTGATCATGAGAAAAATGAAGGATTTAAGCTTTTGCCATTTTGTGCATGAAGATGATCAACCAATTGAAGTTGGATTAGCGAGGCGCCTATCCATCGCAACTAGTTCCAAGGATGTGTTGAGCTGTGCAGTTCACTTGAGCATCCGCGCTGTCCATATTTTCGAAAAAGGTGAACTACCTGAAGATTTCATGACTAAAATCTTTGCAAAGTTCAAGCATTTGAAAGTACTTGATTTCGAAGATTCTTCATTGAACTATGTTCCTGATAATTTAGGAAACTTTCTTCACTTGAGATACTTAAACTTGAGGAATACAAAAGTGCAGGCTCTTCCTAAATCTATTGGTAACCTTCATAACTTAGAAACCTTGGATCTGAGGCAAACCATTGTGCATCAGTTACCAAGTGAGATAAAGAAGCTCACAAAGCTACGACATCTTTCGGCTTATTACAGAAACTACGAAACAGATTATTGTGCTATCAGAACTACTAAAGGAGTGGTGGTGAAAAATGGTATTGAATTCTTGACATCCCTACAAAACCTTTATTTTGTTGAAGCAGATCATGGTGAGCTAGACCTTATCGAAAAGCTTAAGAAGTTGAGGCAGTTAAGGAGGTTAGGCTTAAGGCGTGTACGTCGAGAATTCGGGAATGCCTTATGTGCTTCAATAGTAGAGATGAAAGAACTTGAATCTCTGAACATCACTGCAGTATCTGAGGATGAAATCATTGACTTAAATTTCATATCATCTCCGCCGCAACTTCGTTGGCTCAACTTGAAAGCGCGACTACAGAAGTTGCCTGACTGGATTCCAAAACTTCAGTATCTTGTTAATCTAAGGCTATGTTTATCCATGTTAGAAGATGATCCTCTAAAGTCATTGAAGAACTTGCCAAATCTACTGCGCCTTTCGTTGTGTGACAACGCCTACAACGGCGAAATTTTGCATTTCGAAGAAAGAGGATTTCCAAAACTGAAGAAACTGCTTCTAGCCCATTTGAATAGAGTTCATTCCATCATCATTGACAATGAGGCTTTACTTGATCTTGAATATTTGAGTGTTGAAAGAATTTCTACATTGAAGAAAGTACCCTTTGGCATCAAACACTTAACAAAGCTTAAAAATATTAACTTTTCTGATATGCCTACAGAATTTGTTGAAAGCATTGATCCTAACAAAGGAAAATTCTATTGCACCATCAATCATGTTCCACTGGTATTCATTCGTCACAAGGTTGGGCCAAAAATAGATGATTATGACACTCTCACTATTCACTCTTCTTCCAAGGTTTCAAATATAAAGGTACCCTTTTTCTCTAATCATATAATGCTGCTATTATCAATGCATAGAACTTCAAATGCTTACAATGGAGTGATGCATTATTGA 2913 0.3811 MAETAVLFVIDQVYKLLLEEFTFLARIHKEFAHIKDELESIGAFLKDADTRAIGDGDTSEGIKVWVKQLREVSFRIEDVIDEYIYLAQRVHHPGCIASFRKIGHLVKSLKARHRIMSEIEDINLSIRGIKERSERYNFQSLHEQGGSTGTKVDKWHDHRLSSIFIEESEVVGFESPRDELVGWLLEGAAERTAISVVGMGGLGKTTLAKLVFDSQNVTGHFDCCAFIIVSQSYTIRGLLIEMIEQFCKETLEPLPQNMHKMDEKTLITEVRQYLQQKRYLVFFDDVWKLDFSDEIELAMPNNNKGSRIIITTRMMHVAEFFKKAFPVRVQSLQLLPPNKAWELFCKKTFRYEIDQNCPLELMDMSNEIVQKCKGLPLAIVAIGGLLSTKAKTMIEWKKLTRNLSLELECNAHLTNLTKILSLSFDDLPYYLKACMLYFGVYPENNSISTGRLTRQWIAEGFVKNEGKRTLEEVAKEYLTELIHRSLVQVSKLGCDGKIKRCQVHGLLREVIMRKMKDLSFCHFVHEDDQPIEVGLARRLSIATSSKDVLSCAVHLSIRAVHIFEKGELPEDFMTKIFAKFKHLKVLDFEDSSLNYVPDNLGNFLHLRYLNLRNTKVQALPKSIGNLHNLETLDLRQTIVHQLPSEIKKLTKLRHLSAYYRNYETDYCAIRTTKGVVVKNGIEFLTSLQNLYFVEADHGELDLIEKLKKLRQLRRLGLRRVRREFGNALCASIVEMKELESLNITAVSEDEIIDLNFISSPPQLRWLNLKARLQKLPDWIPKLQYLVNLRLCLSMLEDDPLKSLKNLPNLLRLSLCDNAYNGEILHFEERGFPKLKKLLLAHLNRVHSIIIDNEALLDLEYLSVERISTLKKVPFGIKHLTKLKNINFSDMPTEFVESIDPNKGKFYCTINHVPLVFIRHKVGPKIDDYDTLTIHSSSKVSNIKVPFFSNHIMLLLSMHRTSNAYNGVMHY* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1013 970 PANTHER DISEASE RESISTANCE PROTEIN RP 28 896 IPR044974 GO:0006952
Lan4g1013 970 Gene3D Ribonuclease Inhibitor 552 907 IPR032675 -
Lan4g1013 970 Gene3D - 424 515 IPR036388 -
Lan4g1013 970 Pfam NB-ARC domain 177 426 IPR002182 GO:0043531
Lan4g1013 970 SUPERFAMILY L domain-like 539 902 - -
Lan4g1013 970 CDD RX-CC_like 2 131 IPR038005 -
Lan4g1013 970 PRINTS Disease resistance protein signature 193 208 - -
Lan4g1013 970 PRINTS Disease resistance protein signature 273 287 - -
Lan4g1013 970 PRINTS Disease resistance protein signature 372 386 - -
Lan4g1013 970 PRINTS Disease resistance protein signature 624 640 - -
Lan4g1013 970 Gene3D - 335 423 IPR042197 -
Lan4g1013 970 Pfam Rx N-terminal domain 5 91 IPR041118 -
Lan4g1013 970 Gene3D - 157 325 IPR027417 -
Lan4g1013 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 438 IPR027417 -
Lan4g1013 970 Gene3D - 4 116 - -
Lan4g1013 970 PANTHER - 28 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1013 Lan-Chr4 14283330 14286281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1013 556 883 Receptor kinase-like Gene Family AT3G28890 26.163 1.45e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1013 K13457 - gmx:100801561 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1013 4 14283330 14286281 Lan2g0337 2 3149145 3151787 LSH