Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1010 ATGTTGATCAAAAACAGTGTTGCTAGCATGAGAAAAATGCTCCATCAATGGTTGTTTACCATCAAATTTATCTGTCTTATTTGCTTTGTTGCAGGCCAAAACAACAGCAACACAGAAGAACAACTTGATTATAGATATGCTTGTTTGGACCAATCTTCTGTTCCAACCTCTAGCACATACCAAACGAATCTCAACAATTTGATTTCTTTACTCTCATCAGATTCTGCTTCTAGCAATGGTTTTGGTAATAGAACTTCAGGTAGTGGTGATGAAGGGAATATGGTTTACGGTCTTTACCTTTGCCGCGGCGATGCCAACACTAGCCTTTGTCACCAATGTGTACAAAATTCTAGCTTGTTATTAAAGCAGCACTGCCCCAATAATGCCTCAGCTATTTTGTGGTACCCTTTTTGTCTATTGAGGTACTCAAACCAGAATTTCTTCGGCAAACTCACCGTAACGCCGAGGATTCCTATGTTTGATGCTAAGCAAAATTTCACTAGTGCTGGAGAGTTTGATAGTGATGCTAGAGTTCTGATGAATGGTTTGATCCAAATGGGATCGGAGGAACCGTTGATGTTCGGGACGCATATGTTCAACATAAATGGTACTCAGAGAAGGTATGGTTGGGTGCAGTGCAGCAGGGATATTACTAATGAGGAATGCAGAACATGTTTGAGCAATTTGCTCGACGATGTTCAAGATTGCTGCGAGAGGAAGAGGGTGTGGCGCGTCTTTTCACCAAGTTGTATTATGATGTATGAAACACAGCCATTCCTTTTGAATGATACACTGCCTGCTGCACAAGCACCACAGCAAGATAAAGGGGCTAACAAAAGGTTCAGGATTATAATAATCGGCGTTGTATCCGGCACTGTAGCAGTAGTACTATTGGCTTTAAGCACTTACTACTACTTCTGGTGCTTGAAACAAAAGAATGACAAAGAACCTATGGAAGAAAATGGACTAAGTCCAATGTTTTCTGAAGATCAAACTCACAAGGAGGAGACTATAAATGGTGACCTTCCTATGATGCCTCTGAGTACTATTATACAAAGCACAGATAACTTTTCTGATGAATATAAATTAGGGAAAGGTGGATTTGGGCCTGTCTACAAGGGTGTTTTGCAAGATGGAAGGCAAATTGCTGTTAAGAGGCTTTCAAAAACTTCAGGTCAAGGTGTGGAGGAATTCAAGAATGAAGTAATACTGATTGCGAAATTGCAGCACCGAAACCTTGTGAGAATGTTGGCTTGCTGCATTGAGCAGAATGAAAAGCTACTTATTTATGAATACATGCCCAATTCTAGTCTTGATTTTCACCTATTTGATATGGTGAAGGGTGCACAGCTAGACTGGAAACAAAGATTAAACATTATTAATGGTATTGCTAAAGGGATTCTATATCTTCATGAGGACTCTAGGCTAAGGGTTATTGACAGAGACCTGAAAGCTAGCAATATTCTGTTAGATCACGAAATGAATCCAAAAATATCAGACTTCGGATTGGCAAGAACATTTGTAGAAGACCAGAACCAGGCAAATACAATTAGAGTTGTAGGAACATATGGATACATGGCTCCTGAGTATGCTATGGAAGGCTTATTTTCAGTGAAATCAGATGTTTTTAGCTTTGGTGTTCTTTTGCTAGAGATCATCAGTGGCAAAAGGAACACTGGATTCTATCTTTCTGAGCAAGGCCAAAGCCTTCTCATATATGCATGGAAGCTGTGGTGTGAAAGCAAAGGTTTGGAACTAATGGATCCAGTGTTAGAAAAGTCATGTGTACCTAGTGAAGTAGTGAAGTGTGTACACATTGGTCTACTTTGTGTTCAAGAAGATGCAGCTGATAGACCTACAATGTCAAGTGTTGTTCATATGCTTGCAAGTCAGACAGTGATTCTCACACAGCCCACACACCCTGCATTTTCTGTTGGAAGAGTTGTCACCACACAAGACTCTTCATCAAATGCTTCAGTAAATTACACTGTTAATGAAGTAACAGTGTCAGAAGTTAGACCTAGGTGA 2028 0.4009 MLIKNSVASMRKMLHQWLFTIKFICLICFVAGQNNSNTEEQLDYRYACLDQSSVPTSSTYQTNLNNLISLLSSDSASSNGFGNRTSGSGDEGNMVYGLYLCRGDANTSLCHQCVQNSSLLLKQHCPNNASAILWYPFCLLRYSNQNFFGKLTVTPRIPMFDAKQNFTSAGEFDSDARVLMNGLIQMGSEEPLMFGTHMFNINGTQRRYGWVQCSRDITNEECRTCLSNLLDDVQDCCERKRVWRVFSPSCIMMYETQPFLLNDTLPAAQAPQQDKGANKRFRIIIIGVVSGTVAVVLLALSTYYYFWCLKQKNDKEPMEENGLSPMFSEDQTHKEETINGDLPMMPLSTIIQSTDNFSDEYKLGKGGFGPVYKGVLQDGRQIAVKRLSKTSGQGVEEFKNEVILIAKLQHRNLVRMLACCIEQNEKLLIYEYMPNSSLDFHLFDMVKGAQLDWKQRLNIINGIAKGILYLHEDSRLRVIDRDLKASNILLDHEMNPKISDFGLARTFVEDQNQANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKRNTGFYLSEQGQSLLIYAWKLWCESKGLELMDPVLEKSCVPSEVVKCVHIGLLCVQEDAADRPTMSSVVHMLASQTVILTQPTHPAFSVGRVVTTQDSSSNASVNYTVNEVTVSEVRPR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1010 675 ProSiteProfiles Gnk2-homologous domain profile. 154 259 IPR002902 -
Lan4g1010 675 CDD STKc_IRAK 363 628 - -
Lan4g1010 675 SUPERFAMILY Protein kinase-like (PK-like) 342 652 IPR011009 -
Lan4g1010 675 Gene3D - 42 147 IPR038408 -
Lan4g1010 675 Gene3D - 158 259 IPR038408 -
Lan4g1010 675 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 47 672 - -
Lan4g1010 675 Pfam Protein tyrosine and serine/threonine kinase 361 628 IPR001245 GO:0004672|GO:0006468
Lan4g1010 675 ProSiteProfiles Protein kinase domain profile. 357 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1010 675 Gene3D Transferase(Phosphotransferase) domain 1 433 638 - -
Lan4g1010 675 ProSiteProfiles Gnk2-homologous domain profile. 42 147 IPR002902 -
Lan4g1010 675 SMART serkin_6 357 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g1010 675 Pfam Domain of unknown function (DUF3403) 630 675 IPR021820 GO:0004674
Lan4g1010 675 Gene3D Phosphorylase Kinase; domain 1 320 432 - -
Lan4g1010 675 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 47 672 - -
Lan4g1010 675 Pfam Salt stress response/antifungal 164 256 IPR002902 -
Lan4g1010 675 Pfam Salt stress response/antifungal 53 145 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1010 Lan-Chr4 14266388 14270852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1010 46 675 Receptor kinase-like Gene Family AT4G05200 41.212 3.79e-170 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g1010 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1010 - - gmx:100798691 1091.26