Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1003 ATGGGGTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGTAGCGGGAGCAATGGAGACACGTTACCATCCTTGCCAAACAGAATTGTCAATAATGGAAAGAGTCGGTCTTCTTGCATATTTACACAGCAGGGTCGAAAGGGTGTTAATCAGGATGCTATGATTGTTTGGGAAGATTTCATGTCTGAAGATACGATTTTTTGTGGTGTCTTTGATGGTCATGGTCCCCATGGTCACCTAGTTGCCCGCAAAGCTCGGGATGTCTTACCCCTAAAACTGCTTTCGTCTCTGCATTCTTGTGAGTCAAAGCGAAATAGGTCAGGTAAAGCTGGTTTCAAAGAGAATATCAAGCTTGACAATGGAGAGTCCGATAAGGATATCTCTGCCCAGGATGAACCGAATTTGATATGGAGAGAAGCTTTCCTGAAGGCATACCACGCTATGGACAAAGAGTTGCGGTCTCATCGAAATTTGGACTGCTTTTGTAGTGGTAGCACAGCTGTCACTATAGTGAAGCAGGGTTCAAATCTATTCATGGGTAGTATTGGGGATTCTCGGGCAATCATGGGATCCAAGGATAGCAATGACTCCATGTTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCGAGGGAAGCAGAAAGAATTAAACGGTGTAAGGGTAGGGTATTTGCTTTGCAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGACTTTTGCTTGAAGGAATATGGAGTGATTTCTATACCAGAATTCTATCACCAAGTGCTTACTGATGGAGATCAGTTCATTGTCATTGCCTCAGATGGGGTCTGGGATGTTTTAAGCAATGAAGAGGTAGTCGAGATAGTATCTTCAGCACCGACTCGATCATCAGCTGCGAGGATTGTGGTGGCATCCGCCGCTCGAGAGTGGAAGCTTAAATATCCTACTTCAAAGATGGATGACTGTGCTGTTGTCTGCCTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTGTGATGAGCAATGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCTGGTAATCCAGTTGAATCAGATGATGTTCAAAAGTCAGAGCCATCTTTGCGAAGGAACTATACTGTGAGAACCTCAGAAGAAAATGTGACTGATGGAGGACTATCTGTTGATGCTGGAGATGGAATATCATCAGCTGAAGAGCAAAACTGGTCTGGTCTGGAGGGCGTAACCCGAGTAAACTCATTGGTTCAGCTCCCTAGATTTTCTGAGGAAAGACCAAATGCTTTATTGTAA 1332 0.4407 MGCCVSTSSRSTCSSGSNGDTLPSLPNRIVNNGKSRSSCIFTQQGRKGVNQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLVARKARDVLPLKLLSSLHSCESKRNRSGKAGFKENIKLDNGESDKDISAQDEPNLIWREAFLKAYHAMDKELRSHRNLDCFCSGSTAVTIVKQGSNLFMGSIGDSRAIMGSKDSNDSMLAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFYHQVLTDGDQFIVIASDGVWDVLSNEEVVEIVSSAPTRSSAARIVVASAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQCFSSATIQSNHSGNPVESDDVQKSEPSLRRNYTVRTSEENVTDGGLSVDAGDGISSAEEQNWSGLEGVTRVNSLVQLPRFSEERPNALL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1003 443 CDD PP2Cc 36 341 IPR001932 -
Lan4g1003 443 SUPERFAMILY PP2C-like 34 343 IPR036457 -
Lan4g1003 443 ProSiteProfiles PPM-type phosphatase domain profile. 37 341 IPR001932 -
Lan4g1003 443 Gene3D - 32 349 IPR036457 -
Lan4g1003 443 PANTHER ALPHABET, ISOFORM E-RELATED 1 429 - -
Lan4g1003 443 PANTHER - 1 429 - -
Lan4g1003 443 SMART PP2C_4 26 339 IPR001932 -
Lan4g1003 443 Pfam Protein phosphatase 2C 65 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1003 Lan-Chr4 13959807 13964425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1003 1 439 PP2C-type Phosphatase Gene Family AT1G03590 70.022 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1003 - - gmx:100798340 739.954