Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1000 ATGGACATGGAGAAAGGGTTGGAGAGAGAGAATGGGTTAGTAACATTGTTCAGTGATGAAGAACTGAGAGAGGTGAGTGGGGTGAAGCGTGTTGGTGAGTATGTTGAAATAACGTGTGGTTGTACTAGTCATAGATATGGTGATGCTGTTGGAAGGCTTAGGGTATTCTTAAATGGGTTTCTTGAAATCACTTGTGAATGCACCCCTGGTTGTCAAGAAGACAAGTTGACTCCTGCTGCATTTGAGAAACACTCTGGAAGAGAAACAGCCAGGAAATGGAAGAATAATATATGGGTAATAGTTAATGGTGAGAAGGTTCCATTGTATAAGACAGTGCTTCTCAAATACTACAATCAACAATCAAAGAGTGCTAATGGATCTCATAGATCCCATAATGGACGGGCTTGCCACCACGACGAGTTTGTTCGCTGTACTCGGTGTAACAAGGAGCGCAGATTCCGTTTGAGGACTAAAGAGGAATGTCGTATTCACCATGATGCTTTGGCTGATGCAGATTGGAAATGTTCTGATCATCCATATGACAAAATAACATGTGATGTTGATGAAGAAAGAGCAAGTCGCAGAATTTACAGGGGATGCACTCGTTCTCCAACATGCAAAGGTTGCACAACATGTGTGTGTTTTGGATGTGATATCTGTCGATTTTCAGATTGCAATTGCCAGACTTGTATTGACTTTACTAGGAATGCCAAAGCTTGA 720 0.4181 MDMEKGLERENGLVTLFSDEELREVSGVKRVGEYVEITCGCTSHRYGDAVGRLRVFLNGFLEITCECTPGCQEDKLTPAAFEKHSGRETARKWKNNIWVIVNGEKVPLYKTVLLKYYNQQSKSANGSHRSHNGRACHHDEFVRCTRCNKERRFRLRTKEECRIHHDALADADWKCSDHPYDKITCDVDEERASRRIYRGCTRSPTCKGCTTCVCFGCDICRFSDCNCQTCIDFTRNAKA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1000 239 PANTHER PROTEIN ULTRAPETALA 1 3 238 - -
Lan4g1000 239 Gene3D - 31 130 IPR010919 -
Lan4g1000 239 PANTHER PROTEIN ULTRAPETALA 1 3 238 IPR020533 -
Lan4g1000 239 ProSiteProfiles SAND domain profile. 20 124 IPR000770 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1000 Lan-Chr4 13897059 13901729 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Lan4g1000 SAND 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1000 - - gmx:100796203 466.077