Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0989 ATGCATTTCATATATACCCATCAATCCATTTCTCTAAGGCCACAACATTTAACTACTTTGTCCAAAATATCAATGGCTTTCAAGAACTTAACCATTCTTGCTTTGCATGTTTCACTTCTACTTTCTTTCATGCCATCCTTATCCATAGCAAATAACTATGCAGCATCAATTGTTTCACCACAAACTATTTGCAACTATACTTTATACCCTTCTTATTGCCAAACTGTGCTTGCTAATCAAAATGGCACCACATTTGACTATTGCAACATTTCCATCAGAAAATCTTTGTCACAGTCACGTAACTTCTTGAACTTAGTCTATTCTTATTATAAAGGTTTCTCATCTTTCTCTCAAATCACAGTTCGTGCTCTTGAAGATTGTCAATTCCTCTCTGAACTTAATTTTGAATACTTATCAAACACTTATGATGTGATTGAAAAATCTAGCAATGTTCTTACCACATCTCAAGTTGAAGATTTTCACACATTTCTTAGTGCTACTTTGACAAATCAACAAACTTGTTTAGATAGCCTAGAAACCTCAACTTCAGACCCAAGAGTGAAAAATGATCTTTATTCCTCTCTCTATAATGATATGAAGCTTAACAGTGTATCCCTTGCATTATTCAAAGAGGCTTGGGTTCCTGAGAATAAAAACTCAACATCATCGGAAAACCATACAAGTCAATCAAATTTCCAAAACCAAGTACGTGCCATCTATGATTCTTCAAAAGGCAATGGGAGAAAACTACTTCAAACAATGGATGATAATGAAAGTATAGTAGTAAAGGATATTGTAGTTGTTAGTAAAGATGGAAGTGGAAACTTCACAACTATCAATGATGCCATAGATGCTGCACCAAATAACACAGTTGCTAGTGATGGTTACTTCATCATTTTTATCACTGAAGGAGTATATCAAGAGTATGTATCTATTGCCAAAAACAAAAAGTTCTTGATGCTGATTGGAGATGGAATCAATCAGACTATTATTACTGGTGATCACAATGTCGTGGATGGTTTTACAACTTTCAACTCAGCAACATTTGCTGTGGTAGCACAAGGGTTTGTAGCAGTTAACATAACATTTCGCAACACTGCTGGACCAAGCAAACACCAAGCAGTTGCAGTAAGAAATGGAGCAGATATGTCCACATTCTATAGTTGCAGCTTTGAAGGGTATCAAGACACTTTATACACACATTCATTGAGACAATTCTATCGTGAATGTGACATATATGGAACAGTTGATTTCATATTTGGAAATGCAGCAGTTGTTTTTCAAAGTTGTAACTTTTATCCTCGTCTTCCAATGAGTCAACAATTCAATGCTATCACTGCTCAAGGTCGTAGTGATCCAAATCAAAACACTGGTATTTCAATACAAAATGGAATAATAAAAGCTGATAATGATTTGGCTCCAATGGTTAGTAGTGTGAAAACATACCTTGGAAGGCCATGGAAGGAGTACTCAAGAACAGTGTATATGGAATGTTTCATGGATAATTTGATAGCTCCTGAAGGATGGCATGAATGGAATGGAGATTTTGCACTAAACACTTCATACTATGCAGAATATAATAACATGGGACCTGGTTCAAATACTCAAAATCGTGTAACATGGTTGGGATATCATGTTATCAATGCTAATGATGCACTTAATTTTACTGTCTCTACCTTCTTGGATGGAGATTTTTGGTTGCCTCAAACTAGTGTTCCTTTTCAGGTGTCTATATAA 1737 0.3535 MHFIYTHQSISLRPQHLTTLSKISMAFKNLTILALHVSLLLSFMPSLSIANNYAASIVSPQTICNYTLYPSYCQTVLANQNGTTFDYCNISIRKSLSQSRNFLNLVYSYYKGFSSFSQITVRALEDCQFLSELNFEYLSNTYDVIEKSSNVLTTSQVEDFHTFLSATLTNQQTCLDSLETSTSDPRVKNDLYSSLYNDMKLNSVSLALFKEAWVPENKNSTSSENHTSQSNFQNQVRAIYDSSKGNGRKLLQTMDDNESIVVKDIVVVSKDGSGNFTTINDAIDAAPNNTVASDGYFIIFITEGVYQEYVSIAKNKKFLMLIGDGINQTIITGDHNVVDGFTTFNSATFAVVAQGFVAVNITFRNTAGPSKHQAVAVRNGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNFYPRLPMSQQFNAITAQGRSDPNQNTGISIQNGIIKADNDLAPMVSSVKTYLGRPWKEYSRTVYMECFMDNLIAPEGWHEWNGDFALNTSYYAEYNNMGPGSNTQNRVTWLGYHVINANDALNFTVSTFLDGDFWLPQTSVPFQVSI* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0989 578 Pfam Pectinesterase 266 564 IPR000070 GO:0030599|GO:0042545
Lan4g0989 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 211 IPR035513 -
Lan4g0989 578 PANTHER PECTINESTERASE 43 576 - -
Lan4g0989 578 SUPERFAMILY Pectin lyase-like 261 575 IPR011050 -
Lan4g0989 578 Pfam Plant invertase/pectin methylesterase inhibitor 61 208 IPR006501 GO:0004857
Lan4g0989 578 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Lan4g0989 578 Gene3D - 260 578 IPR012334 -
Lan4g0989 578 SMART PMEI_2 55 208 IPR006501 GO:0004857
Lan4g0989 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 210 IPR035513 -
Lan4g0989 578 CDD PMEI-like_3 62 213 - -
Lan4g0989 578 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 43 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0989 Lan-Chr4 13716843 13718740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0989 62 574 Carbohydrate Esterase AT1G02810 56.124 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0989 K01051 - gmx:100792847 848.58