Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0981 ATGGAGCATATGAATATGACAACCATTAATGATGCATCAAATGGTGAAAGAGGATTAGTATCAATGATTGGTGGCAGCGGTGGTGAAGGTGGTGGTGGTGGTGGTATTGGTGGTGGTGGGGTGGAAGAGGTGGCTCTTAAGAAGGGTCCTTGGACAACGACAGAGGATGCTATTCTCATAGACTATGTGACAAAGCATGGTGAAGGAAATTGGAATGCGGTGCAAAGGAATACCGGGTTGGCTAGATGTGGCAAGAGTTGTAGGCTCAGATGGGCTAACCATTTGAGACCAAATTTGAAGAAGGGTGCTTTCTCCCCTGAGGAAGAGAAACTCATTGTTGAGCTCCATTCACAGTTTGGCAACAAATGGGCTCGAATGGCTGCTTTGTTACCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAATACAAGGGTGAAGAGACGCCAAAGACAAGGTCTTCCACTATATTCAGATGACCATGATCACCCTACAACACCCACTACACCCACCACAACCACCCCTTCTCCATTTCTCAACCAAACAGGATCAAACACAAACACAGTCACAAAGTTTGATTTTCTTCATCAAAACTATCACCACCACAGTCCACTTTCTCCAACAGCACAACAATCCCATCATCATCATTCTCCTCTATCTTCACCACTCAACCATAGACCACCACCTTCCTACTCCCCTCACCATTTCATGGACCCTGCACCCTCCTATTCCAATCAACAATTGTCCTCAACTGGACCTTCCTCTCTCTCCTTTACCTTCCAGAGACCAACACCAATGCTCGGTAACCCTCTTCGATTCAAGCGATACCGTTCCTCTCCAAACTTCAACCTCCACCATCTCCCTTCCATCACCCCTTACTCCACCTCTGCACCCCCTGATCAGATGGCTGATCTTGGCGCATTCAGGTTCCCACAACAGCACAACTCCAGTTTTTCACCACAGTATTTTCAGACAGAATTGTTAGATTCCAATCGAATGGTTTCGACCCACAATTCAGTTTTCTCAACCAAACTGGAGCTCCCTTCAAACCAATATTCTCAGCCACAAGTGCAGCAAGAGGTTAAGCATGATATAGATTTCAATGATCCTTCTTTGCAAACTAGTAGCGGATTGCTAGGGGATCTTCTTTTTGAAGCTCAGGCAATAGCATCTGGTCAGAACTCAAAGAAACGAAATTATTTGAGCTTAAACGAAGGAAATGATGTGTTTGATGGATACCAAAACTTTGATGACTGGCCTCTTTGCTCTAATTACTGGTCTTCTACTTCAGGAGTGAAACGAAAGGAAGAATCACCAGACCTTAGCAAATCCGTGAATGAGGACATGTCAAAATTACTTACAGGAATGCCTTCAACAATGCAGGGTACAGATTGGAACAATAACAGTGCAGCAGAAGTCTCCAATAATGTCCAATCTTCTGGTGTCACCACAGACGACAATTTTGGACTTGACAACAAACCCATAGCTTCCTTGTTTCCTCTCACCAATACAATAAACCATAATGAAAACCAGGGCTACTACTCTTGGGACAATTTACCTGGTCTATGCTGA 1572 0.444 MEHMNMTTINDASNGERGLVSMIGGSGGEGGGGGGIGGGGVEEVALKKGPWTTTEDAILIDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLIVELHSQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDHDHPTTPTTPTTTTPSPFLNQTGSNTNTVTKFDFLHQNYHHHSPLSPTAQQSHHHHSPLSSPLNHRPPPSYSPHHFMDPAPSYSNQQLSSTGPSSLSFTFQRPTPMLGNPLRFKRYRSSPNFNLHHLPSITPYSTSAPPDQMADLGAFRFPQQHNSSFSPQYFQTELLDSNRMVSTHNSVFSTKLELPSNQYSQPQVQQEVKHDIDFNDPSLQTSSGLLGDLLFEAQAIASGQNSKKRNYLSLNEGNDVFDGYQNFDDWPLCSNYWSSTSGVKRKEESPDLSKSVNEDMSKLLTGMPSTMQGTDWNNNSAAEVSNNVQSSGVTTDDNFGLDNKPIASLFPLTNTINHNENQGYYSWDNLPGLC* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0981 523 MobiDBLite consensus disorder prediction 152 185 - -
Lan4g0981 523 SMART sant 47 97 IPR001005 -
Lan4g0981 523 SMART sant 100 148 IPR001005 -
Lan4g0981 523 MobiDBLite consensus disorder prediction 199 263 - -
Lan4g0981 523 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Lan4g0981 523 Pfam Myb-like DNA-binding domain 101 144 IPR001005 -
Lan4g0981 523 Gene3D - 103 149 - -
Lan4g0981 523 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 29 518 - -
Lan4g0981 523 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Lan4g0981 523 MobiDBLite consensus disorder prediction 239 263 - -
Lan4g0981 523 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 29 518 - -
Lan4g0981 523 Gene3D - 47 100 - -
Lan4g0981 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Lan4g0981 523 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 95 IPR017930 -
Lan4g0981 523 MobiDBLite consensus disorder prediction 162 185 - -
Lan4g0981 523 CDD SANT 50 95 IPR001005 -
Lan4g0981 523 SUPERFAMILY Homeodomain-like 46 142 IPR009057 -
Lan4g0981 523 MobiDBLite consensus disorder prediction 201 218 - -
Lan4g0981 523 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Lan4g0981 523 CDD SANT 103 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0981 Lan-Chr4 13574491 13578953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0981 287 523 MYB Transcription Factor Family AT4G26930 31.439 7.28e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan4g0981 Myb_DNA-binding 4.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0981 - - lang:109329119 713.375