Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0973 ATGGGTAACTGTTTAGGGAAATGTGAAGATTCAGATTCAGAACCAGAAGACATTGGTCAAAGATATGATGGGTCTGGTGTGCACAATCATAAGACTCATGAAACCTTTGCAAACAATTCAAGACCACAACCTAATAATCAACAACCTTATCAGTTACCTGAAAAGCCTTATGTTCATGTTCCAAGCCCAAAACCAATTCAGAAACCAGACACAATCCTAGGAAAGCCATTTGAGGATGTGAAACAATTCTACACACTTGGTAAAGAATTGGGTAGCGGACAATTCGGTGTGACACATCTATGCACTGAGAATTCAACTGGGTTGTTATATGCTTGCAAGTCAATCTCAAAGAGAAAGCTTGTTAGCAAATCTGATAAGGAAGATATAAAGAGGGAGATTCAGATTATGCAGCATTTGAGTGGCCAACCTAACATTGTTCAGTTCAAAGGTGCTTATGAGGATAAGAGTTTCGTTCGGGTTGTTATGGAGTTATGTGCTGGTGGTGAACTATTTGATAGGATTATTGCTAAGGGACATTACAGTGAAAGGGCTGCAGCTTCTATATGTAGACAGATTGTTAATGTTGTTCATATTTGCCATTTTATGGGTGTGATGCATAGGGATCTTAAGCCAGAGAATTTCTTGTTGTCTAGTAAGGATGAAAATGCTCTTATCAAGGCAACAGATTTTGGGTTGTCAGTTTTTATTGAAGAAGGAAAGCTGTATCGCGATATAGTTGGAAGTGCTTATTATGTTGCTCCAGAAGTACTGAGGCGCAGATGTGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATATTGTATATCTTACTTAGTGGTGTCCCTCCATTTTGGGCTGAGACCGAAAAGGGAATATTTGATGCCATATTGGAAGGAGATATTGATTTTGAAAGTCAACCATGGCCTAAAATATCAGGCAGTGCTAAGGACCTTGTTCGTAAGATGCTTATACAAGATCCGAAGAAACGCATTACTTCTGCTCAAGTTCTTGAGCACCCATGGATTAAAGATGGAAATGCTTCTGACAAGCCAATAGACAGTGCAGTCCTTTCGAGAATGAAGCAATTCAGAGCCATGAATAAACTAAAGAAACTTGCGCTGAAGGTCATTGCTGAGAATATGTCTGCTGAAGACATCCAAGGCTTAAAGGCAATGTTTACAAATATGGACACCGACAAGAGTGGTTCAATCACCTATGAAGAACTGAAGGCGGGATTGCAAAGACTTGGTTCAAAGCTTACGGAGGCCGAAGTGAAGCAACTTATGGAAGCTGCGGATGTAGATGGAAATGGCACAATCGACTATATAGAATTCATCACTGCTACAATGCATAGACACAAATTAGAAAAAGATGACAATCTTTACAAAGCCTTCCAATATTTTGATAAGGACAACAGTGGGTTTATTACAGGAGATGAACTGCAAACTGCCATGAAAGAATATGGTATGGGTGATGATGCCACAATCAACGAAATTATATCCGAAGTCGATACAATCATATCTGAAGTGGATACAGATAATGATGGAAGAATCAACTTTGAAGAGTTCTGTGCAATGATGAGGAGTGGAAACCAACAACATGCCAAGCTATTCTAA 1617 0.3939 MGNCLGKCEDSDSEPEDIGQRYDGSGVHNHKTHETFANNSRPQPNNQQPYQLPEKPYVHVPSPKPIQKPDTILGKPFEDVKQFYTLGKELGSGQFGVTHLCTENSTGLLYACKSISKRKLVSKSDKEDIKREIQIMQHLSGQPNIVQFKGAYEDKSFVRVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDENALIKATDFGLSVFIEEGKLYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGDIDFESQPWPKISGSAKDLVRKMLIQDPKKRITSAQVLEHPWIKDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSAEDIQGLKAMFTNMDTDKSGSITYEELKAGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHKLEKDDNLYKAFQYFDKDNSGFITGDELQTAMKEYGMGDDATINEIISEVDTIISEVDTDNDGRINFEEFCAMMRSGNQQHAKLF* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0973 538 Gene3D Transferase(Phosphotransferase) domain 1 170 349 - -
Lan4g0973 538 ProSiteProfiles Protein kinase domain profile. 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0973 538 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
Lan4g0973 538 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Lan4g0973 538 CDD STKc_CAMK 83 341 - -
Lan4g0973 538 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Lan4g0973 538 Coils Coil 406 426 - -
Lan4g0973 538 MobiDBLite consensus disorder prediction 1 55 - -
Lan4g0973 538 Gene3D Phosphorylase Kinase; domain 1 86 169 - -
Lan4g0973 538 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 533 - -
Lan4g0973 538 SMART efh_1 460 488 IPR002048 GO:0005509
Lan4g0973 538 SMART efh_1 424 452 IPR002048 GO:0005509
Lan4g0973 538 SMART efh_1 502 530 IPR002048 GO:0005509
Lan4g0973 538 SMART efh_1 388 416 IPR002048 GO:0005509
Lan4g0973 538 MobiDBLite consensus disorder prediction 31 52 - -
Lan4g0973 538 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Lan4g0973 538 ProSiteProfiles EF-hand calcium-binding domain profile. 384 419 IPR002048 GO:0005509
Lan4g0973 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lan4g0973 538 Gene3D - 350 536 - -
Lan4g0973 538 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Lan4g0973 538 SMART serkin_6 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0973 538 MobiDBLite consensus disorder prediction 9 30 - -
Lan4g0973 538 SUPERFAMILY Protein kinase-like (PK-like) 83 361 IPR011009 -
Lan4g0973 538 ProSiteProfiles EF-hand calcium-binding domain profile. 498 533 IPR002048 GO:0005509
Lan4g0973 538 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-LIKE 45 533 - -
Lan4g0973 538 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Lan4g0973 538 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Lan4g0973 538 SUPERFAMILY EF-hand 381 528 IPR011992 -
Lan4g0973 538 Pfam EF-hand domain pair 459 528 IPR002048 GO:0005509
Lan4g0973 538 Pfam EF-hand domain pair 389 449 IPR002048 GO:0005509
Lan4g0973 538 Pfam Protein kinase domain 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0973 Lan-Chr4 12767805 12772819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0973 62 538 EF-hand Containing Proteins AT3G20410 80.625 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan4g0973 Pkinase 2.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0973 K13412 - gmx:100798651 908.286