Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0971 ATGAGTTGCTTTCCATGTTGTACCTCACAAGAGAGGATTAACAAGAGGTCATTGAACAAGAGTATTAAGGAATATCGTCAAGGAAAGGCTAAAACCTCATTTAGCAATCTCTCTCTTAAAACTGATAGTGGCAAAAAAAGGTTCATAGCAGGAGAGATATCAAAGCTTGGAAAAGGAAATATTACCTCCACAATCTTTTCATATCGTGAGCTATGTGATGCAACTCAAAATTTTCACCCTTCTAATATGATTGGTGAAGGAGGCTTTGGGAGAGTATACAGAGGATACATTAAAAGCACAAACCAAGTTGTTGCAGTGAAGCAACTAGACAGAAATGGGTTTCAAGGAAATAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCTAACCTTGTTAGTTTGGTAGGGTATTGTGCTGAAGGTGAACAAAGGATTTTGGTATATGAATACATGGTCAATGGTTCTTTAGAAGATCACCTACTTGACTTAAGGCCTGGTAGTAGGCCTTTGGAGTGGCAAACAAGAATGAGAATTGCAGAAGGTGCAGCAAAAGGACTTGAATATTTACATGATGTAGCAAATCCTCCAGTAATATATCGTGATTTCAAAGCATCAAACATATTGTTAGATGAAAACTTCAATCCAAAGCTTTCTGATTTTGGATTAGCAAAGGTTGGTCCAATTGGAGATAAGCCACATGTATCAACAAGGATAATGGGAACTTATGGCTATTGTGCTCCTGAGTATGCATCCACAGGACATTTGACTGCAAGATCAGATGTCTACAGCTTTGGAGTAGTGTTTTTAGAAATGATCACAGGAAGAAGAGTAATTGATAGTTCAAGACCATCAAATGAGCAAAATTTAGTCCTATGGGCACAACCACTTCTGAAAGACAGAAGGAAATTTACGTTAATGGCTGATCCCATGCTAGAAGATAACTACCCCATAAAGGGTCTATATCAAGCTCTAGCAGTAGCAGCAATGTGTCTCCAAGTGGAAGCGGATACTAGGCCTTGGATCAGTGATGTAGTTATAGCTCTTGAGTTTTTAGCCAAGAAGAAATTAGAAGTGGGTCAAGAACAACACACAGAAGAGAGTTCTGTTCAGCATGAAGATAGTTGTGGAGACTACGAATCTAATGATGACAATGATGATTACGATGATGACGACAATGACGATGAAGATGATGATGATGACAACAATGATGATGATGAAGATGATGAGGATGAAGACGATGAGGATGAAGATGATGCTGATGATAATGATGCTGATGATCGTCACGATGACAAAAAAAGGGTAGTGATGGTAAATGCATCTTCAAATTAG 1341 0.3848 MSCFPCCTSQERINKRSLNKSIKEYRQGKAKTSFSNLSLKTDSGKKRFIAGEISKLGKGNITSTIFSYRELCDATQNFHPSNMIGEGGFGRVYRGYIKSTNQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVSLVGYCAEGEQRILVYEYMVNGSLEDHLLDLRPGSRPLEWQTRMRIAEGAAKGLEYLHDVANPPVIYRDFKASNILLDENFNPKLSDFGLAKVGPIGDKPHVSTRIMGTYGYCAPEYASTGHLTARSDVYSFGVVFLEMITGRRVIDSSRPSNEQNLVLWAQPLLKDRRKFTLMADPMLEDNYPIKGLYQALAVAAMCLQVEADTRPWISDVVIALEFLAKKKLEVGQEQHTEESSVQHEDSCGDYESNDDNDDYDDDDNDDEDDDDDNNDDDEDDEDEDDEDEDDADDNDADDRHDDKKRVVMVNASSN* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0971 446 MobiDBLite consensus disorder prediction 382 428 - -
Lan4g0971 446 Pfam Protein kinase domain 79 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0971 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lan4g0971 446 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0971 446 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 376 - -
Lan4g0971 446 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Lan4g0971 446 PANTHER OS07G0668900 PROTEIN 1 376 - -
Lan4g0971 446 CDD STKc_IRAK 84 353 - -
Lan4g0971 446 Gene3D Transferase(Phosphotransferase) domain 1 155 381 - -
Lan4g0971 446 Gene3D Phosphorylase Kinase; domain 1 63 154 - -
Lan4g0971 446 MobiDBLite consensus disorder prediction 364 381 - -
Lan4g0971 446 MobiDBLite consensus disorder prediction 364 446 - -
Lan4g0971 446 SUPERFAMILY Protein kinase-like (PK-like) 64 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0971 Lan-Chr4 12624998 12628739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0971 1 356 Glycoside Hydrolase AT3G07070 61.003 2.60e-154 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan4g0971 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0971 - - gmx:100790474 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0971 4 12624998 12628739 Lan2g1295 2 23863666 23866181 LSH
Lan4g0971 4 12624998 12628739 Lan2g1295 2 23863666 23866181 PCT
Lan2g1295 2 23863666 23866181 Lan4g0971 4 12624998 12628739 PCT