Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0953 ATGAATCCTTCTAGTAACAACATTTTCAGGTGGTCATTGATAGCTGGTCATTTGCCCGGTAGAACAGATAACGAGATAAAAAACTATTGGAATTCTCATTTGAGTAGAAAGATATTTAGCTATAATTATACTACAAGTACTAAACATGATGCCACCACCATGATCGAGCCTCAGATAATAGCTTTCCCTCCCAAGCGAAGAGGTGGTAGAACTAGCCGATGGGCTATGAAGAAGAACAAAACCTATGCCCTAAAAACAAAGCTTAATAATCATCAACAAAGTCCAAAACAAGTTCAAATTCATCAGAATAATGATGCAGTTCCTCTACCACCTACTCCATCACTTGAAAGTGAGAACTTGACAATGATAATGGATTTCATGGCTTTGGACCCGGAGAGAGAAGAAGAAGAAGAAGAAGTAGGTGATGGGTTAGGTAAAAGTTCCTCTCAACAAGAAGAAAACACAAGAGGTACATTGGTTCAAGAGGATCAGTACTTTGCAGTGGAGGAAGGTGAAAGAATAAATGAGATGTTTTGCATTGAGGGTTGGAAAGAAAAAAGTGATTATGAGATTTTGGGACAGTACCAAGAAGTAATTAATGGTTGTTGGGAGTTGAATTTTAATGAGTTCATGGACACTTGTTTTGTGGAACAAGAAAGTGGGGTTTTGTCGTTGACATTTGAAGAAGTGGTGGGAAATGGTGCAACAAGAAATGAACCAACATGTACAACTAACCAATGCTCAAATGGGGAGTGTAGAGATTTATGTTCTTCTATGGCTTTGAGTTTAGATCATGGTAATAATAATAATAGTGACTTGGATTTTGAGAGTGTCATACAATTCAATGGTAATATGGTGTCAAAGTCATTGGAGGATAAAGAAAACTTGTTGTCATGGCTATGGGAAGATGATGATGGTTGGGGAAAGGATTGTGATCAATTTGGAGATATTGATTCTCAACTGGATGTAATGGTTGCTTGGTTTAGTTGA 990 0.3747 MNPSSNNIFRWSLIAGHLPGRTDNEIKNYWNSHLSRKIFSYNYTTSTKHDATTMIEPQIIAFPPKRRGGRTSRWAMKKNKTYALKTKLNNHQQSPKQVQIHQNNDAVPLPPTPSLESENLTMIMDFMALDPEREEEEEEVGDGLGKSSSQQEENTRGTLVQEDQYFAVEEGERINEMFCIEGWKEKSDYEILGQYQEVINGCWELNFNEFMDTCFVEQESGVLSLTFEEVVGNGATRNEPTCTTNQCSNGECRDLCSSMALSLDHGNNNNSDLDFESVIQFNGNMVSKSLEDKENLLSWLWEDDDGWGKDCDQFGDIDSQLDVMVAWFS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0953 329 MobiDBLite consensus disorder prediction 132 160 - -
Lan4g0953 329 ProSiteProfiles Myb-like domain profile. 10 34 IPR001005 -
Lan4g0953 329 CDD SANT 10 34 IPR001005 -
Lan4g0953 329 Pfam Myb-like DNA-binding domain 10 34 IPR001005 -
Lan4g0953 329 SUPERFAMILY Homeodomain-like 9 44 IPR009057 -
Lan4g0953 329 MobiDBLite consensus disorder prediction 144 160 - -
Lan4g0953 329 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 10 162 - -
Lan4g0953 329 PANTHER MYB-RELATED PROTEIN P 10 162 - -
Lan4g0953 329 Gene3D - 4 56 - -
Lan4g0953 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 38 IPR017930 -
Lan4g0953 329 MobiDBLite consensus disorder prediction 93 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0953 Lan-Chr4 12017564 12018809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0953 10 77 MYB Transcription Factor Family AT2G47460 61.111 4.65e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan4g0953 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0953 K09422 - gmx:100814275 177.563