Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0941 ATGGAAGATGAATATTTACTCACCAATTCTCAAACCATTCAACACCATGATCTACCCTTTCATGCTTCTAAGTCATTCAATGATGTTACCACCTTACAAAAACCACCACAACTTTCAGAAATTCAACCCATCATTCAACAACAAAAACAACACCACTCATTGAATCAAAATCAAATTTTTAAGAAGAAACTTGGTCGTCCAAAATCAGCACCTTCTATATTTTCAATGCATGAACTCAAACCAAAGTCAACACAACACTCTAAACCTGATTCATCTAGTTCAATTATAAGACAAGGCATTTGTTTACTTGTTATTTATCTTTGTTTTGGTGTTACAATATATTCATTCAACACAGAACATTTTTCAGGGATTGAAACACACCCTATTATTGATGCACTTTATTTTTGTATTGTTACTATGTGTACCATAGGTTATGGTGACATAGCACCTTTGACCCCAGTTACTAAAGTTTTTGCTTGTGTTTTTGTGTTGGTTGGGTTTGGTTTTATTGATATACTCCTTAGTGGGCTTGTTAACTATGTTCTAGATTTGCAAGAGAGTATGATTTTAACAGGGTTAGAAATGAGTGCTCCAATAAGAACTAGAACAAGGGAAGGTTTTTCTGCAAGGAATTACATTGTTGATGTGGCAAAAGGGAGAATGAGGATTAGGTTAAAAGTTGGTTTGGCACTTTGTGTTGTTGTCATCTGTATCGGGATTGGGAGTTTTGTGTTGTATTTTGTTGAGGGTTTGGATTTGGTTGATTCTGTTTATTTATCGGTTATGTCTGTTACAACTGTTGGGTATGGTGATAGAGCCTTTAAGACCCCTCTAGGGAGGTTATTTGCAGCTATTTGGCTGCTGTTTTCGACGTTGATGGTGGCGAGGGCGTTCTTGTATTTGGCCGAGGCCAGAATCGATAGGAGGCATAGGAGAATGGCCAAGAAAGTTTTGCATAGAGAAATCACTGTTGAGGATTTGTTTGCTGCAGATATCAACAACACTGGTTTCATCAGTAAGTCTGAGTATGTAATTTTCAAGCTGAAAGAGATGGGTAAAATACAGGAAAAAGATATATTGCAAATTTGTAACCAATTCAGGAGGCTCGACCCGACAAACTGCGGGAAGATAACACTACCTCATCTCTTGGAGGGCACATGA 1161 0.3738 MEDEYLLTNSQTIQHHDLPFHASKSFNDVTTLQKPPQLSEIQPIIQQQKQHHSLNQNQIFKKKLGRPKSAPSIFSMHELKPKSTQHSKPDSSSSIIRQGICLLVIYLCFGVTIYSFNTEHFSGIETHPIIDALYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESMILTGLEMSAPIRTRTREGFSARNYIVDVAKGRMRIRLKVGLALCVVVICIGIGSFVLYFVEGLDLVDSVYLSVMSVTTVGYGDRAFKTPLGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHREITVEDLFAADINNTGFISKSEYVIFKLKEMGKIQEKDILQICNQFRRLDPTNCGKITLPHLLEGT* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0941 386 SUPERFAMILY Voltage-gated potassium channels 85 181 - -
Lan4g0941 386 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 45 382 - -
Lan4g0941 386 Gene3D - 76 195 - -
Lan4g0941 386 Gene3D - 209 329 - -
Lan4g0941 386 SUPERFAMILY Voltage-gated potassium channels 218 325 - -
Lan4g0941 386 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 45 382 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lan4g0941 386 SUPERFAMILY EF-hand 327 382 IPR011992 -
Lan4g0941 386 Pfam Ion channel 232 303 IPR013099 -
Lan4g0941 386 Pfam Ion channel 102 181 IPR013099 -
Lan4g0941 386 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Lan4g0941 386 PRINTS Two pore domain K+ channel signature 138 166 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lan4g0941 386 PRINTS Two pore domain K+ channel signature 265 274 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0941 Lan-Chr4 11819887 11822923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0941 40 383 Ion Channels AT4G01840 63.143 2.36e-157 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0941 K05389 - gmx:100780438 547.354