Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0934 ATGGCGTCTTCATTCTCAACACAGTTGCTTCACTGTCAGAACCCACTTCCTCATCTCCAGGGTAATAGTAGTCAAGTTAGATCTCATATGGTATGTTGCAGTACCAGATTATCACAGTTTGGTTATAGTAAAGGATTGACATCAAGATCACATTATGCATCGAGGTTTTCTGCTACACAACAATCTGTAGCGAAGTCAACGAAATATAGGAGAATGACATGTGTCAATGCTACAGACAATGTTGTAGAGCTGCAAGCCAAAGTGACAACCAAGTGTTTCTTTGATGTCGAAGTTGGGGGTGAACTTGTGGGCAGGGTTGTCTTGGGCCTGTTTGGCGAGGTCGTTCCTAAGACGGTTGAGAATTTCCGTGCATTGTGCACAGGAGAGAAAGGATACGGTTACAAAGGAAGCTCCTTCCATCGTATAATCAAAGACTTCATGATTCAGGGAGGGGACTTTACTGAAGGAGATGGGACTGGTGGCACAAGTATCTATGGTGCTCGTTTTAAAGACGAGAGTTTTGCCTTGAAGCATATTGGTCCTGGAGTTTTGAGCATGGCTAATGCCGGTCCTAATACCAATGGCAGTCAATTTTTCATTTGTACTGTAAAGACTCCATGGCTAGACAATCGCCATGTTGTGTTTGGACATGTCATCGATGGACTGGATGTCGTGAAGACGCTTGAATCCCAGGAGAGAAGCAGGTTAGATATCCCTCGGAAGCCTTGCAGAATTGTCAATTGCGGAGAACTGCCTAACGACGATTGA 768 0.4453 MASSFSTQLLHCQNPLPHLQGNSSQVRSHMVCCSTRLSQFGYSKGLTSRSHYASRFSATQQSVAKSTKYRRMTCVNATDNVVELQAKVTTKCFFDVEVGGELVGRVVLGLFGEVVPKTVENFRALCTGEKGYGYKGSSFHRIIKDFMIQGGDFTEGDGTGGTSIYGARFKDESFALKHIGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGLDVVKTLESQERSRLDIPRKPCRIVNCGELPNDD* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0934 255 SUPERFAMILY Cyclophilin-like 87 252 IPR029000 -
Lan4g0934 255 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 134 151 IPR020892 GO:0003755|GO:0006457
Lan4g0934 255 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 93 250 IPR002130 GO:0000413|GO:0003755
Lan4g0934 255 Gene3D - 76 255 IPR029000 -
Lan4g0934 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 47 254 - -
Lan4g0934 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 47 254 - -
Lan4g0934 255 CDD cyclophilin_ABH_like 91 249 - -
Lan4g0934 255 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 94 249 IPR002130 GO:0000413|GO:0003755
Lan4g0934 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 IPR002130 GO:0000413|GO:0003755
Lan4g0934 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 IPR002130 GO:0000413|GO:0003755
Lan4g0934 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 182 197 IPR002130 GO:0000413|GO:0003755
Lan4g0934 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 197 209 IPR002130 GO:0000413|GO:0003755
Lan4g0934 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 210 225 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0934 Lan-Chr4 11733591 11736398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0934 18 253 U-box Gene Family AT5G67530 35.714 6.18e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0934 K03768 - gmx:100785805 403.29