Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0916 ATGGATTCAATGTCAGGATTGTTGAGAGAATCCAGTGATGTTGATAGATTACCAGAAGAAATGAATGATATGAAAATTAGAGATGATAAAGAAATGGAAGCCATAGTTATTGATGGTAATGGAACTGAGACAGGACACATTATTGTTACAACCATTGGGGGTAGAAATGGTGAACCTAAACAGACAATAAGCTATATGGCAGAGCGGGTTGTCGGGCATGGATCATTTGGAGTTGTTTTCCAGGCTAAATGCTTGGAGACTGGTGAAACTGTGGCTATAAAGAAGGTTCTTCAAGACAAGAGGTATAAGAACCGGGAGCTGCAAACAATGCGTCTTCTTGACCACCCGAACGTTGTCTCTTTGAAGCATTGTTTCTTTTCAACCACCGAAAAGGATGAACTATACCTTAATCTGGTGCTTGAGTATGTTCCTGAAACAGTTCACCGTGTGATCAAACATTACAACAAGTTGAACCAAAGGATGCCGCTGATATATGTGAAACTCTATACATACCAGATCTTTAGGGCACTATCTTATATTCATCGTTGTATCGGAGTGTGCCATCGAGATATCAAGCCTCAAAATATTTTAGTCAACCCACATACCCACCAGGTTAAAATATGTGACTTCGGAAGTGCAAAAGTCTTGATAAAAGGCGAACCAAACATATCGTACATATGTTCTAGATATTATAGAGCACCCGAGCTTATATTTGGAGCAACTGAATATACTACAGCCATTGATGTTTGGTCTGTTGGTTGTGTAATGGCTGAGCTTCTGCTTGGACAGCCTTTGTTCCCTGGTGAGAGTGGAGTTGATCAGCTTGTCGAGATCATCAAGGTCCTGGGCACCCCAACAAGGGAAGAGATTAAGTGCATGAACCCTAACTACACAGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGATTTTTCATAAGCGCATGCCTCCGGAAGCTGTTGATTTGGTATCAAGACTACTACAATACTCCCCTAATCTGCGATGCACGGCTTTAGATGCCTTGACCCATCCTTTCTTTGACGAACTTCGTGACCCAGATACTCGCTTGCTAAATGGTCGTTTGCTTCCACCATTGTTCAATTTCAAATCTCATGAACTGAAGGGAGTACCCATTGAGATTTTGATGAAATTGGTTCCAGAGCATGCAAGAAAGCAATGCCTGTTTCTTGGTTTGTGA 1206 0.4138 MDSMSGLLRESSDVDRLPEEMNDMKIRDDKEMEAIVIDGNGTETGHIIVTTIGGRNGEPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNILVNPHTHQVKICDFGSAKVLIKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDELRDPDTRLLNGRLLPPLFNFKSHELKGVPIEILMKLVPEHARKQCLFLGL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0916 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Lan4g0916 401 ProSitePatterns Protein kinases ATP-binding region signature. 71 95 IPR017441 GO:0005524
Lan4g0916 401 Pfam Protein kinase domain 65 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0916 401 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 11 398 - -
Lan4g0916 401 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 11 398 - -
Lan4g0916 401 MobiDBLite consensus disorder prediction 1 21 - -
Lan4g0916 401 SUPERFAMILY Protein kinase-like (PK-like) 64 375 IPR011009 -
Lan4g0916 401 CDD STKc_GSK3 60 352 IPR039192 -
Lan4g0916 401 Gene3D Phosphorylase Kinase; domain 1 49 144 - -
Lan4g0916 401 Gene3D Transferase(Phosphotransferase) domain 1 145 393 - -
Lan4g0916 401 SMART serkin_6 65 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0916 401 ProSiteProfiles Protein kinase domain profile. 65 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0916 Lan-Chr4 11172268 11177942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0916 65 358 MAP Kinase Gene Family AT1G73670 38.978 4.73e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lan4g0916 Pkinase 1.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0916 K00924 - gmx:100795659 783.097