Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0909 ATGGAGATGCAGAAAGAATGTTCCAAAGGAAGTTTTTTCAGCTTGTTTGATTGGAATTCCAAATCTAGAAAGAAGTTGCTTTGGAATAATCCTAATTTACCTGAAGGTTCAAAGCATGGGAAGGAAAATTTGGAGAGCATGCCAATGGTGCAGACCAATAGGATTAAGGTAGATAAAAATGGAGCCAGTTCAAGTAACATTGTAAGTTCTGATTTTAGCTGTGCCCTCTCGGTTAATAGTGATGAAGGATATGGGAGTAAGGCCCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTCGTTGCCAACTTCAGAAGTCACTGAGCACTCCTCCACTTCATTATATGGCTCTAACGCCCATAGTGCTTATCATTGTCGTGAGAATGCTCTTTATTCAAAGGATAACTTTCGCCATGTGGACTATAGAAACGTGCTGCTTAAGGTGAAGTCTTCTTGCGATGCAATGGAATCAAAGGCACAAAAAGTTGGAAACTGCCCAATAAAGAGATTCCAAACTGAAATGTTGCCTCCGAGTTCTGCTAAACCCATCCCTGTTACTCATAATAAGCTGTTATCTCCTATCAAGAGTCCCAGTTTTCTGACCCCAAAGAATGCTGCTCACATTATGGAGGCCGCTTCCAAGATAATTGACGCAAGCCCTCGGCCGTATATGAGAAATAAAATGGCATCAGTTGGACCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAGGAGAGATTGGAAGCTTCTCAATTTGTAGCCATCCCTGAAAAGTCCGTGTATCCGAGAACTGCCAACCTTGCAAATGGCAAGCCTGGTGAGAGGAACAGTAATTTATATAAATATGCTCCAGCTTTAAATGGTTCGAGAGATTCAGGAAAAACTAGTTGTCGCAACTTAGCAAGTAAAGGAAAATCAGTTCCGCATTCAATACGGTCCCAAACCAATGTTCAGAGCAGAGATACAGTGACTGCAAATGGCAATAAGAAATACTTGAAGCAGAAAGGACTGGCCGAGATAAAGTCAACCCACTTCTCCAGGAGCGAGAAACCAAGTGCACAGCGAGGAATGCAGCAGAGAACTGGCAGAAGCCGGGATAGCAATGTGCTTGGGCAGAATAATCAAAAGCAGAATAGTTTAACCAACAAAGGTAAATCGACTTCAAAAATAGATTTCACCAAGCCTACAACTCAAACTTCATCTTCAGAAAGCTCTACTCGAATAAGGAAGACAAAGAACAAGGGTGCTGTAAATACCAAGATTCAGCCTAAAAGGTCAAGCACTAGAGCAACTAATTTCCAAAAGGAGATCCCACCATTCGATAGTACTTCTAAAAATAAAAAGTATATGAGCCGGGATGTTCTTGAGGCAAGAGGTCAGGATAAAGCTGTAAATAATTTTGAAAGAAAGTCCATAAAATGCAACATTACTACTGACGGAATTATCGAGGAGGATGCATTTAGCATGAATGAAAGCAATGATGTGATTTCATTCACATTTACATCTCCCTTGAGGAGAAGCATGCCCGAGTCCTTGTCCTTTGCTGAGCAGGTGGTGGAAAGTAGAAATGGAACTGGTGTCGATTCTTTTGGGCATAACGATAATCATTATCCCAAAAAATTATCATTTTCTCCTCCAGGGTTACCTATGATAAATGGTGATAGTTTAAGTGACTTATTGGAGAAAAAGCTTCAAGAATTGACATCTAGAATGGATTTGCCTCAGTGTACATTGGCCACAGAGGAGTCTTCTGCCGATTCGAGATCTTATTTGCAAGACCAAGTTCCCAGTGTTGTAAGCCCCATGTCCGTGGAACAAGGTGGAAGCTTTCACCCTTACCTGTTTAGTGATAAACTGGATAACATGCATGACTGGCATTATTCAAATGATGATCCAGCGTTTCACATGAATCCGCAATTTCAGAAAGCAATGGAAGATCCTAGCTGTAGTGGCAACAGTGACAACGGATATGATCGAAGTTGTCAGCATCCTAGAGCTGTCACAGTTTTTGAAAGTCCTTCTGTCAGTGAAAGCTACATGGATAGTGAAGACAGTGCATATGGCAGCACAGTTTATTCTTACATGCAAGACGAAGAAGTATCTAATTTTTCTGATATAAATGAATCTGTATCACTTGAAAAGGAAGCCAGTTCGGCGCAAAGCTCTTCTGTATTGGGGGATGAAAATATGGCTGTGAAACAACTACGTGAAATAACAAATTTGGAAGATTTTAAAAGATCAAGGTACATGGGACTTGAATATGTACATGATATACTCACCAATGCGGAGTTTATAGCAGAAGAGTATGTCATCGGTCAAATCAATACAATCATAATGCCAAACATCTTTGATCGGTTGGAGAATCAAATCAATGGAGCAGAAAACTGTCAAGAGTGCTCTAAGCTTGAAAGGAAGGTTGTATTTGACTTTGTGAGTGAGTGCCTAGAGTTGAGATGCAGGCGAGCTTTTATTGGAACCTGCAAAGAATGGCCTCGATGGGAGATATCATTTCAAAGGAAGAGCGTTTTGGCCGAGGAATTGTACAGGCAGATGCTCGGTTTTGTTAACATGGAAGAAGAAGTAATGGTGGATGAGCTTGTCAACAATGACATGAGCACTGGTTGCGGTCGATGGCTTGACTTCGACGCTGAAGCCTTTGAAGAGGGTTTAGAGGTTGAGCAGGAAATAGTAGATAGTTTGGTGAATGAATTGGTTTCTGATTTGTTACATGTTTAA 2736 0.4108 MEMQKECSKGSFFSLFDWNSKSRKKLLWNNPNLPEGSKHGKENLESMPMVQTNRIKVDKNGASSSNIVSSDFSCALSVNSDEGYGSKAPGLVARLMGLDSLPTSEVTEHSSTSLYGSNAHSAYHCRENALYSKDNFRHVDYRNVLLKVKSSCDAMESKAQKVGNCPIKRFQTEMLPPSSAKPIPVTHNKLLSPIKSPSFLTPKNAAHIMEAASKIIDASPRPYMRNKMASVGPSSVPLRILDLKERLEASQFVAIPEKSVYPRTANLANGKPGERNSNLYKYAPALNGSRDSGKTSCRNLASKGKSVPHSIRSQTNVQSRDTVTANGNKKYLKQKGLAEIKSTHFSRSEKPSAQRGMQQRTGRSRDSNVLGQNNQKQNSLTNKGKSTSKIDFTKPTTQTSSSESSTRIRKTKNKGAVNTKIQPKRSSTRATNFQKEIPPFDSTSKNKKYMSRDVLEARGQDKAVNNFERKSIKCNITTDGIIEEDAFSMNESNDVISFTFTSPLRRSMPESLSFAEQVVESRNGTGVDSFGHNDNHYPKKLSFSPPGLPMINGDSLSDLLEKKLQELTSRMDLPQCTLATEESSADSRSYLQDQVPSVVSPMSVEQGGSFHPYLFSDKLDNMHDWHYSNDDPAFHMNPQFQKAMEDPSCSGNSDNGYDRSCQHPRAVTVFESPSVSESYMDSEDSAYGSTVYSYMQDEEVSNFSDINESVSLEKEASSAQSSSVLGDENMAVKQLREITNLEDFKRSRYMGLEYVHDILTNAEFIAEEYVIGQINTIIMPNIFDRLENQINGAENCQECSKLERKVVFDFVSECLELRCRRAFIGTCKEWPRWEISFQRKSVLAEELYRQMLGFVNMEEEVMVDELVNNDMSTGCGRWLDFDAEAFEEGLEVEQEIVDSLVNELVSDLLHV* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0909 911 Pfam Domain of unknown function (DUF4378) 752 903 IPR025486 -
Lan4g0909 911 MobiDBLite consensus disorder prediction 334 348 - -
Lan4g0909 911 Pfam DUF761-associated sequence motif 77 106 IPR032795 -
Lan4g0909 911 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 911 - -
Lan4g0909 911 MobiDBLite consensus disorder prediction 265 431 - -
Lan4g0909 911 MobiDBLite consensus disorder prediction 349 431 - -
Lan4g0909 911 MobiDBLite consensus disorder prediction 289 329 - -
Lan4g0909 911 PANTHER DUF4378 DOMAIN PROTEIN 1 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0909 Lan-Chr4 11083562 11088043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0909 3 909 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.004 9.20e-97 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0909 - - lang:109330253 1214.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0909 4 11083562 11088043 Lan16g1032 16 17524262 17528795 LSH
Lan4g0909 4 11083562 11088043 Lan20g0626 20 4939760 4943969 PCT
Lan20g0626 20 4939760 4943969 Lan4g0909 4 11083562 11088043 PCT