Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0904 ATGGCAACAGAGCAAGTTTTGCCATTCTCTGTTATATCTGTGGTTGAAGATGTTCTTCAAAATCATGGTCGAAGATTGAGTGATGTTAATTTGGCTTCAAGAAAAGCTGAAGAAACTTCCTTGAGAAGGTATGAAGCAGCTGGTTGGCTGAGAAAGACAGTTGGAGTTGTTGGAGGGAAAGACTTGCCTGCAGAACCTTCCGAAGAAGATTTCCGGCTCGGATTGCGCAGCGGGATTATCCTCTGCAATGTTCTTAATAAAGTTCAACCAGGGGCAGTGTCCAAGGTAGTTGAAGCTCCGAATGATTCTGTTCTTATTCCTGATGGAGCAGCATTGTCTGCATATCAATACTTCGAAAATGTACGAAACTTTCTTGTAGCTTTGGAGGAAGTAGGGCTTCCAACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGGTAGTGAATTGTGTTCTAGCACTTAAGTCCTATGCTGAATGGAAGCAAGGCGGAAAACTCGGAACATGGAAATATGGTGGCATTGGGAGTTCAAAACCACCTACCTCTGGGAAACAACTTATGAGGAAAAACTCAGAACCATTCATGAAGTCTTTATGGACTCCTACACCATCGGTAGACAGAGATGCTATGAGTGATCACTCTTCATACAGCGATTCCGGGCTTGAGCACAATGAAGGGGGTTCCTTTCCTTTCTTACATTCATTAGTTCGCGAATATTTGTGCGACAAGAGGCCAGAAGAAATTCCCACTGTTGTGGAGTCCCTGCTAGGCAAAGTAATGGAGGAGTTTGAGCGTCGTATGCAAATCCAACACGAAACATTTTCATACTTGCAGCTTAAAATAACTCAAGATGAAAAGCCACCTTCGGAACTAGAATGTTCGATCTCAAAAGCTACTTCTGTTGATGAAGAGATGGAAGAAAAGGAAGATGCACAGGACCTACAGGTTAAAGAGGAGTTAGAAGAGGAATCTTATGATACGAAGAATGACCACGACGAATCGAGTAGCCAGAATTTGAAGAAGCAAGAATTAGTCCAACAACAAAATAGAAGCATTCAGGAATTGAAAACTATAGTCTATGAAACAAAATCCGGAATGGAATTTCTGCAAAAGAAATACCAGGAGGAGATCATCTATCTAAGTAAGCACTTGCATAGCCTAGCTTCGGCTGCATCCGGATATCATAAAGTTCTCGAAGAAAACCGCAAGTTATACAATCAAGTGCAGGACCTGAAAGGAAATATTCGGGTGTACTGTCGAGTTCGGCCCTTCTTAGGTGGCCAACCAAGCCATTATAGCTCTGTCAGTAATGTGGAGGAGGGAAATATCTCAATCTTAACACCTTCCAAATATGGCAAAGAAGGGAAGAAGATATTTAATTTCAATAGAGCATTCGGTCCTTCTGCAACCCAAGCGGAAGTTTTCTCCGATATGCAGCCTCTGATTCGTTCTGTTCTAGACGGGTACAATGTTTGTATATTTGCCTATGGTCAAACAGGATCCGGAAAAACACACACTATGTCTGGACCGGACGAACTTACTGATGAAACAATAGGTGTCAACTACCGTGCGTTGGGAGATCTTTTCCTTCTCTCGGAACAAAGGAAAGACACCATTTGCTACGATATCAATGTCCAGATGCTCGAGATTTACAATGAGCAAGTCCGAGACTTATTAACTACAGATGGTGCCATCAAAAGATTAGAAATTCGCAACAGTTCCCATAATGGCATTAACGTGCCGGACGCAAACCTTGTTCCTGTTTCATCAACTTCAGATGTCATAAATTTGATGAACTTGGGACATAAGAATCGGGCCGTTGGTTCTACTGCCATGAATGATCGCAGTAGTCGTTCTCACAGCTGCCTAACAGTTCATGTTCAAGGAAGATACCTGACATCGGGAAGTACAATTCGCGGTAGTATGCATCTCGTGGACCTGGCCGGAAGTGAGAGGGCTGATAAATCCGAGGCCACAGGGGATAGACTTAAGGAAGCTCAACATATAAACAAGTCACTTTCTGCCTTAGGAGATGTAATTGCTTCCCTTGCCTCAAAGAATGCACATGTTCCATACAGAAACAGTAAACTTACTCAGCTGCTTCAGGATTCTCTTGGAGGGCAAGCTAAGACACTCATGTTTGTTCATATTAGTCCTGAGCCTGAAGCTCTTGGAGAAACACTTAGTACATTGAAGTTCGCAGAACGAGTTTCGACTATCGAACTTGGTGCTGCTAGAGTTAACAAAGATGCTAGTAGTACTAGTAATTCAGATGTGAAAGAGCTTAAAGAACAGATTGCAAGTCTAAAGGGAGCATTGGCTAGGAAGGAAGGAGAACAAGTACGTGCAAATAGTAACAACCATGAAGCACCAAAGTTGAAATCTTGTGGTTCTTCTCCTATAAGATTTGGAATCCAAAAGCCAAGAGATGATTCAAGTAGCTTAGAGGGTCAGAAAAAGGCAGCATCAAAGCTGAAAAGAAGAAGCTTAGACATCCATGACATGTATAGAAACTCACCTCAATGGCCACATGGTGCAAATTATGGAACAAATACAAAAGATGATGATAAAGAATCATCAACTTCTAGTGATTGGAATGATAAGATTATGATGAAAAGAAATGATAGTTTAACAAGTGATGATAGCTTAGTTGGACAATGGGAATCAGAAACTAAACAATATTCTCCATTATTAAGTCCTAGTTCACTTTCAGAGACTTCAAAAATGTGCATTGAAACTTCTTCATTGCATGGTTCTGATATGAATATTAGTGATGAATGTGATGAACTTGAGATTGCAACTAGTGAATCTTCAGAATCTGAATTGAATTGGTTATCACCACATATACCTAAACCAACTACTATTTCAAATGGATTACCCTCTAAATCAAAGAAATCAACAACTCAACCCAAAGTATTAAGAATACCAGAACCAAGGACTATGATCCCATCATTAATTCCTACACCAGCAAGGAAATATTCAACAGTAGTTAGTCAACCCAGAAAGTTGCCAGGGCCTATTGATGTAAAGAGAAAAAGTGGAAATGCCAAGTGA 3063 0.4097 MATEQVLPFSVISVVEDVLQNHGRRLSDVNLASRKAEETSLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRLGLRSGIILCNVLNKVQPGAVSKVVEAPNDSVLIPDGAALSAYQYFENVRNFLVALEEVGLPTFEASDLEQGGKSSRVVNCVLALKSYAEWKQGGKLGTWKYGGIGSSKPPTSGKQLMRKNSEPFMKSLWTPTPSVDRDAMSDHSSYSDSGLEHNEGGSFPFLHSLVREYLCDKRPEEIPTVVESLLGKVMEEFERRMQIQHETFSYLQLKITQDEKPPSELECSISKATSVDEEMEEKEDAQDLQVKEELEEESYDTKNDHDESSSQNLKKQELVQQQNRSIQELKTIVYETKSGMEFLQKKYQEEIIYLSKHLHSLASAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGQPSHYSSVSNVEEGNISILTPSKYGKEGKKIFNFNRAFGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPDELTDETIGVNYRALGDLFLLSEQRKDTICYDINVQMLEIYNEQVRDLLTTDGAIKRLEIRNSSHNGINVPDANLVPVSSTSDVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGRYLTSGSTIRGSMHLVDLAGSERADKSEATGDRLKEAQHINKSLSALGDVIASLASKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETLSTLKFAERVSTIELGAARVNKDASSTSNSDVKELKEQIASLKGALARKEGEQVRANSNNHEAPKLKSCGSSPIRFGIQKPRDDSSSLEGQKKAASKLKRRSLDIHDMYRNSPQWPHGANYGTNTKDDDKESSTSSDWNDKIMMKRNDSLTSDDSLVGQWESETKQYSPLLSPSSLSETSKMCIETSSLHGSDMNISDECDELEIATSESSESELNWLSPHIPKPTTISNGLPSKSKKSTTQPKVLRIPEPRTMIPSLIPTPARKYSTVVSQPRKLPGPIDVKRKSGNAK* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0904 1020 ProSitePatterns Kinesin motor domain signature. 643 654 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan4g0904 1020 MobiDBLite consensus disorder prediction 939 973 - -
Lan4g0904 1020 SUPERFAMILY Calponin-homology domain, CH-domain 43 173 IPR036872 -
Lan4g0904 1020 MobiDBLite consensus disorder prediction 938 1020 - -
Lan4g0904 1020 Gene3D - 27 176 IPR036872 -
Lan4g0904 1020 ProSiteProfiles Kinesin motor domain profile. 417 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g0904 1020 PRINTS Kinesin heavy chain signature 491 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g0904 1020 PRINTS Kinesin heavy chain signature 613 630 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g0904 1020 PRINTS Kinesin heavy chain signature 644 662 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g0904 1020 PRINTS Kinesin heavy chain signature 693 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g0904 1020 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1001 - -
Lan4g0904 1020 MobiDBLite consensus disorder prediction 210 225 - -
Lan4g0904 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 743 IPR027417 -
Lan4g0904 1020 Coils Coil 762 782 - -
Lan4g0904 1020 CDD KISc_C_terminal 415 745 - -
Lan4g0904 1020 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1001 - -
Lan4g0904 1020 SMART kinesin_4 415 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g0904 1020 MobiDBLite consensus disorder prediction 815 837 - -
Lan4g0904 1020 MobiDBLite consensus disorder prediction 853 872 - -
Lan4g0904 1020 Pfam Calponin homology (CH) domain 43 162 IPR001715 GO:0005515
Lan4g0904 1020 MobiDBLite consensus disorder prediction 324 341 - -
Lan4g0904 1020 MobiDBLite consensus disorder prediction 204 226 - -
Lan4g0904 1020 Pfam Kinesin motor domain 423 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan4g0904 1020 SMART ch_5 42 160 IPR001715 GO:0005515
Lan4g0904 1020 MobiDBLite consensus disorder prediction 778 872 - -
Lan4g0904 1020 Coils Coil 397 417 - -
Lan4g0904 1020 MobiDBLite consensus disorder prediction 301 318 - -
Lan4g0904 1020 MobiDBLite consensus disorder prediction 301 348 - -
Lan4g0904 1020 Gene3D Kinesin motor domain 358 745 IPR036961 -
Lan4g0904 1020 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Lan4g0904 1020 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0904 Lan-Chr4 11023248 11030950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0904 405 783 Calmodulin-binding Proteins AT5G65930 41.361 2.18e-76 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0904 K10406 - gmx:100799535 1402.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0904 4 11023248 11030950 Lan16g1039 16 17587757 17597635 LSH
Lan4g0904 4 11023248 11030950 Lan2g0272 2 2301709 2310078 LSH