Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0903 ATGGATTCTAATAAGCCACTTCTGTTACAATCTCCAAGTACACCAAATACACAAGAGATTCTTCCAACTATTCATGTTTTCCCAGAACTACCTAAATCAAAGTCAAGTTCCAGCAACATTGCCACCTTTTCTAGGATGGACTCAAGCAACAAAGTTGAGAAATCTTCAAATTATGAACCCACATTGAACCAAAAGAATTCGTCGCGAAGAAGTGCAATGTCAGTTCACTCTGGGAGTTCTAGTAGTAGTACAAAGAATTCTGTGAAGGAAGTGAGTTTCAACCATTTGGGATCGAAGCCGGTGAGGTATGGCTCAAAGGGTGCTGATTCTGAAGGACTCAGCATGTCTCAGAAGGAATTAAGAGATGAGGATGCAAGATTGGTTTATATAAATGATCCTGAGAAGACCAATGAGAGGTTTGAATTTTCGGGAAATTGGATTAGTACCGCGAAATACTCTATCCTTACTTTTATTCCAAGGAATCTGTTTGAACAATTCCATAGAGTTGCTTATGTTTATTTTCTTATCATTGCCATTCTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGAGGGGTTGTTTCTGTTTTACCATTGGCCTTTGTTCTTATAGTTTCAGCTGTGAAGGATGCTTATGAGGATTGGAGGCGGCATCGGGCAGATAAAGTCGAAAACAACAGGTTAGCATCAGTTTCGGTTAATGGCGAATTGGTAGAGAAGAAATGGAAGGATATAAGAGTTGGTGAGGTCATAAAAATCAAGGCAAATGAAACCATTCCTTGTGATATTGTGTTGCTTTCAACTAGTGATCCAACTGGAGTTGCATATGTGCAAACTACTAATCTTGACGGTGAGTCAAATTTGAAGACTAGGTATGCGAAACAAGAGACACATTCCGAAAAGGGTCGATTTAATGGGTTGATTAAGTGTGAGAAACCAAATAGGAACATATATGGGTTTCAGGCTAATATTGAAATTGATGGCGAAAAGTTGTCACTTGGTTCCTCCAATATTGTGCTAAGAGGATGTGAAGTTAAGAATACTAATTGGGCACTTGGTGTTGCTGTATATTGTGGTGGTGAGACCAAAGCTATGCTTAACAGCTCTGGTGCTCCTTCGAAGAGGAGCCGGCTTGAGACTCGCATGAATTCCGAGATCATTATGCTTTCTTTCTTTCTTGTAGCTTTGTGTACAGTTACCTCAGTTTGCGCAGCCGTTTGGTTGAAGCGGCACAAGGATGAGTTGAATCTCTTGCCTTATTATCGGAAACTGGATGTTTCGGAGGGGAAAGAGGATAGCTATAAATATTATGGATGGGCACTAGAAGTTCTTTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCCATAGCCTTGTACATTTCTATGGAGCTTGTTCGCATCGGTCAAGCCTACTTCATGATTGGAGACAACAGAATGTATGATGAGGCAACAAAGTCAAGATTTCAGTGCAGGGCCTTAAACATTAATGAAGATTTGGGGCAAATCAAATATGTCTTTTCGGACAAAACAGGTACACTTACCGAGAATAAGATGGAGTTTCAATGTGCCAGCATTTCGGGGGTTGATTACAGTTCTACAAAAGCCATATTGGAGGATGAGCAAGTTGAATATTCTGTACAAGTGGATGGAAAGGTCTTGAGAACTAAAATGAAGGTTAAAGTGAACCTAGAGCTTTTGCACTTATCAAGAAGTGGAATTGAAAATAAGGACAGAAAACAGATTCATGATTTCTTTCTAGCACTGGCTGCATGCAATACTATTGTTCCTCTTGTTGTTGACACAACTGATCCTGATGTCAAGTTGATAGATTACCAAGGCGAATCACCGGATGAACAAGCCTTAGCATATGCTGCTGCTGCCTATGGTTTTACGCTTATCGAACGAACCTCCAGCCATATAACAATTGATATTCATGGAGAAAGGCAAAGGTTCAATGTCTTAGGTATGCATGAATTCGATAGTGATCGGAAGAGGATGTCAGTTATACTAGGATGCCCTGACAATTCTGTAAAACTTTTTGTCAAAGGGGCAGATACATCTATGCTTGATGTGAAAGATAAATCATTTGACATGGACATAATAAGAGCAACCGAAACCCATCTTCATTCTTATTCTACACTGGGTTTGCGAACACTTGTTATCGGGATGAGGCGATTGAATACTTCAGAATTTGAGCAATGGCATGCTGCCTATGAGGCAGCAAGCAGTGCTTTGTTTGGCAGGGCCGCAACGCTTCGCAAGGTCGCTAGCAATGTCGAAAGCAATCTCTGCATATTAGGTGCAACTGCTATTGAAGATAAGCTGCAGCAAGGTGTGCCTGAAGCCATTGAGTCTCTAAGGACTGCAGGTATTAAAGTATGGGTATTAACCGGGGACAAACAAGAAACTGCCGTATCAATCGGCTACTCGTCAAAGCTCCTAACAAGAAACATGACTCAAATTATAATCAATAGCATCAATAGAGATTCAAGTAGAAGGAGGTTAGAGGAAGCTATTGTCATGACTCAAAAACTCATGTCTAGAACATCATCTGAAGGACCTTCTGATACGATTTCAACTCAAGTAGCCTTGATTATTGATGGTACCAGCCTTGTACATATCCTTGACAATGATCTTGAAGAACAGCTATTTGAACTTGCAAGTGGGTGTTCCGTTGTTCTTTGTTGTCGAGTGGCACCGCTTCAGAAGGCTGGGATTGTTTCCCTTGTTAAGAAGAGGACTTCAGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTATCAATGATTCAAATGGCTGATGTTGGAGTTGGAATCAGTGGACAAGAGGGTAGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGGCACTGGAATTACCAACGGCTAGGTTACATGATACTATACAACTTCTACAGAAATGCTGTTCTTGTCCTTGTCCTATTTTGGTAA 3003 0.4079 MDSNKPLLLQSPSTPNTQEILPTIHVFPELPKSKSSSSNIATFSRMDSSNKVEKSSNYEPTLNQKNSSRRSAMSVHSGSSSSSTKNSVKEVSFNHLGSKPVRYGSKGADSEGLSMSQKELRDEDARLVYINDPEKTNERFEFSGNWISTAKYSILTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGGVVSVLPLAFVLIVSAVKDAYEDWRRHRADKVENNRLASVSVNGELVEKKWKDIRVGEVIKIKANETIPCDIVLLSTSDPTGVAYVQTTNLDGESNLKTRYAKQETHSEKGRFNGLIKCEKPNRNIYGFQANIEIDGEKLSLGSSNIVLRGCEVKNTNWALGVAVYCGGETKAMLNSSGAPSKRSRLETRMNSEIIMLSFFLVALCTVTSVCAAVWLKRHKDELNLLPYYRKLDVSEGKEDSYKYYGWALEVLFTFLMSVIVFQVMIPIALYISMELVRIGQAYFMIGDNRMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASISGVDYSSTKAILEDEQVEYSVQVDGKVLRTKMKVKVNLELLHLSRSGIENKDRKQIHDFFLALAACNTIVPLVVDTTDPDVKLIDYQGESPDEQALAYAAAAYGFTLIERTSSHITIDIHGERQRFNVLGMHEFDSDRKRMSVILGCPDNSVKLFVKGADTSMLDVKDKSFDMDIIRATETHLHSYSTLGLRTLVIGMRRLNTSEFEQWHAAYEAASSALFGRAATLRKVASNVESNLCILGATAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAVSIGYSSKLLTRNMTQIIINSINRDSSRRRLEEAIVMTQKLMSRTSSEGPSDTISTQVALIIDGTSLVHILDNDLEEQLFELASGCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFW* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0903 1000 SUPERFAMILY HAD-like 496 965 IPR036412 -
Lan4g0903 1000 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 1000 IPR023298 -
Lan4g0903 1000 Pfam Cation transport ATPase (P-type) 617 692 - -
Lan4g0903 1000 MobiDBLite consensus disorder prediction 1 89 - -
Lan4g0903 1000 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 1000 - -
Lan4g0903 1000 MobiDBLite consensus disorder prediction 30 89 - -
Lan4g0903 1000 PRINTS P-type cation-transporting ATPase superfamily signature 509 523 - -
Lan4g0903 1000 PRINTS P-type cation-transporting ATPase superfamily signature 792 802 - -
Lan4g0903 1000 PRINTS P-type cation-transporting ATPase superfamily signature 911 923 - -
Lan4g0903 1000 SFLD C1.7: P-type atpase like 493 975 - -
Lan4g0903 1000 SFLD p-type atpase 493 975 IPR044492 -
Lan4g0903 1000 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 515 781 IPR023299 GO:0000166
Lan4g0903 1000 Gene3D - 198 366 - -
Lan4g0903 1000 Pfam E1-E2 ATPase 228 467 - -
Lan4g0903 1000 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 142 1000 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan4g0903 1000 Pfam Phospholipid-translocating P-type ATPase C-terminal 952 1000 IPR032630 -
Lan4g0903 1000 Pfam Phospholipid-translocating ATPase N-terminal 128 193 IPR032631 -
Lan4g0903 1000 CDD P-type_ATPase_APLT_Dnf-like 144 1000 - -
Lan4g0903 1000 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 442 531 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan4g0903 1000 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 193 305 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan4g0903 1000 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 894 1000 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan4g0903 1000 Gene3D - 765 964 IPR023214 -
Lan4g0903 1000 ProSitePatterns E1-E2 ATPases phosphorylation site. 511 517 IPR018303 -
Lan4g0903 1000 MobiDBLite consensus disorder prediction 1 21 - -
Lan4g0903 1000 SUPERFAMILY Calcium ATPase, transduction domain A 225 363 IPR008250 -
Lan4g0903 1000 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 1000 - -
Lan4g0903 1000 Gene3D - 613 745 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0903 Lan-Chr4 10996316 11000239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0903 46 1000 Primary Pumps ATPases AT5G04930 70.135 0.0 1401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0903 K14802 - gmx:100813982 1493.79