Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0901 ATGGGAAATTATTGTGGAAAACCAGTTGCTCATGTATCTTCTAATTTTACTGGAAGTAAAAACAAGGCTGTGAATAAGACAAAGCAGGATTTGTTTACTTCTCATCAAAAAGCTGCTTTGCAAACTTCACAATCAAATGTTAACAAATCTATCTCCAATAACCTTAAGTCCTTCAGTTTCAATGATCTAAAGGAGGCCACTAAGAACTTCCGAAGAGAAAATTTAATCGGAGAAGGAGGGTTTGGGTATGTCTTCAAGGGATGGATTGATGAGATCACTTATGCTCCAACAAAACCAGGGAGTGGAATGGTAGTAGCAATTAAGAATCTTAAGCCAGAAAGCTTTCAAGGCCACAAAGAATGGCTTACCGAAATCAATTATCTCGGGCAGCTTCAACATGAAAATCTGGTGAAACTTATTGGTTATTGTTTGGATGGTAAAAGCAGGCTTCTAATTTATGAGTTTATGCAAAAAGGAAGCTTGGAGAATCACTTATTCAGAAAAGGTGTTCAACCCATAGCCTGGGCTACAAGGATCAATATCGCGATCGGTGTAGCAAGAGGATTAACATTCTTGCATTCCCTAAATTCAAATGTTATCTTTCGCGATTTAAAGGCTTCCAATATCCTACTTGATTCAGATTTCAATGCAAAGCTTTCTGATTTTGGCTTGGCAAGAGATGGTCCTACAGGAGATAACACACACGTTTCAACAAGAGTTATCGGAACTCAAGGTTATGCTGCACCAGAGTATGTTGCTACAGGTCATTTGACCCCAAGAAGTGATGTATACAGCTTTGGTGTTGTCTTGTTAGAGTTACTAACGGGAAGGCGTGCAATAGAAGACAGGACCCGGATTTTCGGATGA 867 0.3922 MGNYCGKPVAHVSSNFTGSKNKAVNKTKQDLFTSHQKAALQTSQSNVNKSISNNLKSFSFNDLKEATKNFRRENLIGEGGFGYVFKGWIDEITYAPTKPGSGMVVAIKNLKPESFQGHKEWLTEINYLGQLQHENLVKLIGYCLDGKSRLLIYEFMQKGSLENHLFRKGVQPIAWATRINIAIGVARGLTFLHSLNSNVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRAIEDRTRIFG* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0901 288 Pfam Protein tyrosine and serine/threonine kinase 73 279 IPR001245 GO:0004672|GO:0006468
Lan4g0901 288 ProSitePatterns Protein kinases ATP-binding region signature. 76 108 IPR017441 GO:0005524
Lan4g0901 288 PANTHER OS01G0588500 PROTEIN-RELATED 18 284 - -
Lan4g0901 288 ProSiteProfiles Protein kinase domain profile. 70 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0901 288 Gene3D Transferase(Phosphotransferase) domain 1 156 286 - -
Lan4g0901 288 SMART serkin_6 70 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0901 288 Gene3D Phosphorylase Kinase; domain 1 43 155 - -
Lan4g0901 288 SUPERFAMILY Protein kinase-like (PK-like) 43 283 IPR011009 -
Lan4g0901 288 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0901 Lan-Chr4 10964395 10978865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0901 41 285 Glycoside Hydrolase AT3G07070 56.000 3.24e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan4g0901 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0901 - - gmx:100800654 483.026