Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0898 ATGGGGCATTTCTCCTCTATGTTCAATGGTTTGGCGCAGTCGTTTTCGATGAAAAAGGGAAGAAGGTCGAGTAAGCATGATAGAAGAGAAGCTGCTGAAGCAATGGTAAAAGATGCTAAGAAAAATGACTTGATATTGTGTAGCTCAGGAACTATTAATGTAGATGGTTCAAACAACTTTGTCTCAGTTTTCTCCAAGAGAGGCAAAAAAGGAGTGAACCAAGATTGCTGCATAGTTTGGGAGGAATTTGGATGCCAAAAAGACATGATCTTTTGTGGAATATTTGATGGGCATGGAGCATGGGGTCACTTTGTGGCTAAAAGAGTAAGAGAGTCAATGCCATCATCTTTGCTATGTAATTGGCAAGAAACAATTGCTCAAACTTCACTTGATCCAGATTCTGATATATATGATGAGAAGAAGCAACCCCGGTTTAATATATGGAAGCATTCTTACTTGAAAACTTGTGCTGACATTGATCAAGAACTCGAGCATTATCGCAAAATAAACTCGTTTTATAGCGGAACTACTGCCCTCTCAATTGTTAGACAGGGTGAACTCATAGTGATAGCAAATGTTGGTGATTCACGTGCTGTGTTAGCTACAATATCAGATGATGGAAATGTTGTACCAATTCAGCTAACAATTGATTTCAAGCCCAATTTACCTCAAGAGGAAGACAGAATAATTCAGTGTGAAGGGAGAGTGTTCTGCTTAGATGATGAGCCAGGGGTGCATAGGGTGTGGTTGCCAGATGAAGAATCACCAGGGCTAGCCATGTCTAGAGCTTTTGGAGATTATTGCATCAAAGAGTATGGTCTTATTTCAGTGCCTGAGGTAACATACAGAAATATAAGCACCAGAGACCAATTTCTTGTGCTTGCTACTGATGGGGTTTGGGATGTACTCTCAAATCAAGAAGCAATAGATATTGTATCTTCAACACCAGACAAAGCAAAATCAGCTAAAAATCTAGTGGAGTGTGCAATGCATGCATGGAAAAGCAAGAGAAGGGGCATTGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTTCCCTTCACAACAGCAACTTACCCTAAAATAG 1095 0.4009 MGHFSSMFNGLAQSFSMKKGRRSSKHDRREAAEAMVKDAKKNDLILCSSGTINVDGSNNFVSVFSKRGKKGVNQDCCIVWEEFGCQKDMIFCGIFDGHGAWGHFVAKRVRESMPSSLLCNWQETIAQTSLDPDSDIYDEKKQPRFNIWKHSYLKTCADIDQELEHYRKINSFYSGTTALSIVRQGELIVIANVGDSRAVLATISDDGNVVPIQLTIDFKPNLPQEEDRIIQCEGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCIKEYGLISVPEVTYRNISTRDQFLVLATDGVWDVLSNQEAIDIVSSTPDKAKSAKNLVECAMHAWKSKRRGIAMDDISAICLFFHSFPSQQQLTLK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0898 364 CDD PP2Cc 59 352 IPR001932 -
Lan4g0898 364 SUPERFAMILY PP2C-like 55 354 IPR036457 -
Lan4g0898 364 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 361 - -
Lan4g0898 364 SMART PP2C_4 51 350 IPR001932 -
Lan4g0898 364 Pfam Protein phosphatase 2C 77 328 IPR001932 -
Lan4g0898 364 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Lan4g0898 364 Gene3D - 48 354 IPR036457 -
Lan4g0898 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0898 Lan-Chr4 10915252 10919816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0898 1 353 PP2C-type Phosphatase Gene Family AT3G05640 71.910 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0898 - - gmx:100808955 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0898 4 10915252 10919816 Lan2g0275 2 2347680 2351172 LSH
Lan4g0898 4 10915252 10919816 Lan4g1298 4 21775657 21779352 PCT
Lan4g1298 4 21775657 21779352 Lan4g0898 4 10915252 10919816 PCT