Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0873 ATGGATAAAGGATTTATGGCACCAACAAGGAAACCCCGGACTATGAATAAGTGGCCTTCAAGTTTAAATGAGGTCTCTCCTGAGAAAGATGGAATTAACTTGAACAAAAATAAGCAACGGAAGAAAATTTTGTCTGATAAATTGGGACCTCAATGGAACAAGGCAGAACTGGAGAGATTTTATGAAGCATACAGGAAGTATGGGAAAGACTGGAAGAAGGTTGCTGCAGTTGTGCGTAATAGATCTGTTGAAATGGTTGAGGCCCTTTACAATATGAACCGGGCGTACCTTTCTCTACCAGAGGGGACAGCTTCTGTTGTTGGTCTGATTGCAATGATGACAGATCACTATAATGTGCTGGAAGAGAGTGACAGTGAAAGGGACAGCAATGATGCACCGGGATCTCGAAAACCTGTGAAACGAAAGCGTGGAAGAGTTCAGCTCAGTGTCTCAAAAGATTCTATCCAGTCTCGGTCAATTGCTTCTGATGATGGTTGCCTATCTCTATTGAAGAGAAGACGCACTGATGGTAGTCAGCCTCGTGCAGTTGGGAAAAGGACACCTCGCATCCCAGTGTACTACTCCAACAAGATAGACGATGGGGAAAATTATATTTTGCCTAATAAAAGAAACCTGAAGTCAGCTTTTGATAATACTGATGATGAAGTTGCACATGTCGCAGCTCTGGCATTAACTGAGGCTGCACATAGAGGTGGCTCTCCCCAAATATCTCAAACACCATACACAAGATCACAGCAAAAGTCCTCTCCTGTTCAAAGCTGGGAAAGAATGCACCAACAGTCTAAGACAGTTCCTACCAAGTTTTATGATGCTTCTATGGATGAAGAGTTCATAGAAGGTAGTATAGAAAGCAGGGGAGCCGAAAATGGAGAATGTGCTAGAGATACTAGTTCCTTGATGGACCTGGGATCAATAGCCACTGTCGAAGTTAATCAGAAATGGGAAAATAAGTACAGAAAGAAAGGGAGTGTGGAAAATGTTGGAAACCATTTTCTTGATGATGGTGGAGAAGCATGTAGTGGCACGGAAGGACTTAATTTAAGTTTGAAAGGAAAAGTTGATATTGAGGTTACTAATGCAAAGCCTGAGAAATTCTCCGAAAAAGGCCAGAGGAAAAGAAACAAGAAACTTTTGTTTGAAGATGAAGGCTCTGCCTTGGATGCTTTGCAAACTTTGGCTGATCTTTCTCTAATGATACCACCTTCAACAATGGAATCTGACTCACCTGTCCAGATGAAGGACGAAAGAATGTATGCTGACAAAGATGAAGAGTCTGTTTTACCTGAAGCCACATCAACCAGCCAAAACAGAGATGGAATTAAACTCCCAGGTCAAAAGGCTGTTCGTGCAGTCCCTGGAGTTGAGGTTTCAACCTCCAAAAAATCTAAACTTGGAAAGGAATCAGAAAATGATATGCAGCTTCCTTCTGCTGATAGGACATGCAAAAAAAAGGGCAAGTCTATGGTTTCGAAGGTAGCAAATGCAAAGCCTGATTCTTATCCAACTGGTCACTTGAATAATGAGGATGGAGATGAAGAGAACAAACCAATGATTAAAGGAAAATGCACTGATCAGACTTTCACTAAAGCAAAACAGTTAAAGTCAGTCAGATCAACAGAAAGTCCTTTGTGTAGTGACCCAAAAGATTTAGCAGCATCAGCTGCAGAAGTCCCACTTGCAAGTGAAGGTATTTTACCGACTAAAAAGAAAAGTAGACGTAAGGCAAGTTTACCGAGAGCATTCATGGCCAAAGAGAAGTGTTCTGAGAACATACTGACAAGCCAACCTATCAATTATTCAACTCCCATCCAGGATAAGGCATTATTCTTGAAGGAAAAGCTTTCTAGTTGTTTGTCATCATATATGTTTCGCAGATGGTGTACGTTTGAGTGGTTCTATAGCGCAATTGATTATCCATGGTTTTCCAAACAGGAGTTCATGGAATACTTAAATCATGTTGGTCTCGGGAATATCCCAAGGCTAACTCGTCTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTTCTTCGTGAAGAAAGACAAAAACTAGAACAGTATCGGGAATCTGTTAGGAAACATTACACTGAATTACGGACTGGTATCAGGGATGGACTTCCAACAGATTTAGCTAAACCTCTATATGTTGGACAACTAGTAATTGCTCTTCACCCAAAGACAAGAGAGATCCATGATGGAAGTGTGCTTACAGTTGACCATGACAAGTGCAGGGTCCAGTTTGACCGCCCTGAATTGGGTGTTGAATTTGTCAGGGACATTGACTGCATGCCTTTGAATCCATTGGAAAATATGCCAGAAGCTCTGAGGTGGCAGATTGGTGCTGGAAATATCCCTTTTATGAGTAAAGAACCACAAATGAAGGGAAATTCCAGTTTTGGTGGGTGTCTGCCTTATGATTCAAGTGGACCTGTGGAGAAGCAACCAGCGTCTTCAATCTCTCTCACTAAGCAGGGAATGGGGGGTGCTAACAATTCCGTTTCCCAAGCAAACGCTGCTATTACTAATTACCTTTGTACACAACCAGCAGTGTCTGCCCAACCATGTACAATGACCGATCATCAAACTAAGGAAGCTGATATACATGCCCTGTCTGAGTTTACACGTGCTCTAGATAAAAAGGAGAAATTAGTAATGGAACTAAAAGTCGCCAATGATGACATGTTGGAAAACCAAAATGGTGTAGAGTGCTTCAGGGATTCAGAGGCTTTCAAGAAGCATTATGGCATGGTACTTTTACAACTAAAGGAAGCCAGTGGACAGGTTTCTAATGCATTACTTCAGTTGAGGCAACACAATTCTTACATAGGAAACTATTTGCCACCATGGATGAAGCCCCCAGTAAGTTTCGATGTTCTGGATGGTCTTCCTAGTGCTAGTGCTTTGGATAGTTCTCTAGCCCAAGAGTTAGGGTCAACTGGCATTGATATTATTAAAGGATCCAGGCTTAAAGCACATGCCATGGTGGATGCTGCATTTCAGGCATTGTCTTCAATGAAGGAAAGCGAAGATGGTTTCATGAAGATTGGGAAGACATTGGATTCTATCAATCATCAGCCTTTGGCCACCAACTCTAGGTTACCTGTCTTCAGGTCCCAAGAGCAAGTAAATGGCAGTTTATCTGGCCCCTTACCCAATGATGATGCACCTGGTCCAAAATTGCATCATGATTCTGTCAAAGTTGATACTCAAATTCCTTCAGAGCTCATAACTTCTTGTGTTGCTACATTGATCATGATACAGAATTGTACCGAACGTCAATATCCTCCAGCTGATGTAGCTCAGATTATAGATTCTGCTGTTACCAGCTTGCATCCATGCTGTCCACAAAACCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATCAAGACCCAGATTTTAGCTCTCATCCCTACTTGA 3468 0.419 MDKGFMAPTRKPRTMNKWPSSLNEVSPEKDGINLNKNKQRKKILSDKLGPQWNKAELERFYEAYRKYGKDWKKVAAVVRNRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSERDSNDAPGSRKPVKRKRGRVQLSVSKDSIQSRSIASDDGCLSLLKRRRTDGSQPRAVGKRTPRIPVYYSNKIDDGENYILPNKRNLKSAFDNTDDEVAHVAALALTEAAHRGGSPQISQTPYTRSQQKSSPVQSWERMHQQSKTVPTKFYDASMDEEFIEGSIESRGAENGECARDTSSLMDLGSIATVEVNQKWENKYRKKGSVENVGNHFLDDGGEACSGTEGLNLSLKGKVDIEVTNAKPEKFSEKGQRKRNKKLLFEDEGSALDALQTLADLSLMIPPSTMESDSPVQMKDERMYADKDEESVLPEATSTSQNRDGIKLPGQKAVRAVPGVEVSTSKKSKLGKESENDMQLPSADRTCKKKGKSMVSKVANAKPDSYPTGHLNNEDGDEENKPMIKGKCTDQTFTKAKQLKSVRSTESPLCSDPKDLAASAAEVPLASEGILPTKKKSRRKASLPRAFMAKEKCSENILTSQPINYSTPIQDKALFLKEKLSSCLSSYMFRRWCTFEWFYSAIDYPWFSKQEFMEYLNHVGLGNIPRLTRLEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYTELRTGIRDGLPTDLAKPLYVGQLVIALHPKTREIHDGSVLTVDHDKCRVQFDRPELGVEFVRDIDCMPLNPLENMPEALRWQIGAGNIPFMSKEPQMKGNSSFGGCLPYDSSGPVEKQPASSISLTKQGMGGANNSVSQANAAITNYLCTQPAVSAQPCTMTDHQTKEADIHALSEFTRALDKKEKLVMELKVANDDMLENQNGVECFRDSEAFKKHYGMVLLQLKEASGQVSNALLQLRQHNSYIGNYLPPWMKPPVSFDVLDGLPSASALDSSLAQELGSTGIDIIKGSRLKAHAMVDAAFQALSSMKESEDGFMKIGKTLDSINHQPLATNSRLPVFRSQEQVNGSLSGPLPNDDAPGPKLHHDSVKVDTQIPSELITSCVATLIMIQNCTERQYPPADVAQIIDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0873 1155 MobiDBLite consensus disorder prediction 238 267 - -
Lan4g0873 1155 MobiDBLite consensus disorder prediction 235 267 - -
Lan4g0873 1155 MobiDBLite consensus disorder prediction 121 157 - -
Lan4g0873 1155 MobiDBLite consensus disorder prediction 427 525 - -
Lan4g0873 1155 Gene3D - 1 104 - -
Lan4g0873 1155 PANTHER LIN-9 6 1155 IPR010561 GO:0006351|GO:0017053
Lan4g0873 1155 SMART sant 48 96 IPR001005 -
Lan4g0873 1155 Coils Coil 891 911 - -
Lan4g0873 1155 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 6 1155 IPR028306 -
Lan4g0873 1155 Pfam Myb-like DNA-binding domain 51 87 IPR001005 -
Lan4g0873 1155 CDD SANT 52 86 IPR001005 -
Lan4g0873 1155 MobiDBLite consensus disorder prediction 467 492 - -
Lan4g0873 1155 ProSiteProfiles SANT domain profile. 47 84 IPR017884 -
Lan4g0873 1155 MobiDBLite consensus disorder prediction 14 30 - -
Lan4g0873 1155 Pfam DIRP 638 739 IPR033471 -
Lan4g0873 1155 Coils Coil 691 711 - -
Lan4g0873 1155 MobiDBLite consensus disorder prediction 1 32 - -
Lan4g0873 1155 SUPERFAMILY Homeodomain-like 50 96 IPR009057 -
Lan4g0873 1155 SMART DIRP_2 639 740 IPR033471 -
Lan4g0873 1155 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0873 Lan-Chr4 10612529 10625940 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan4g0873 DIRP 5.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0873 - - gmx:100789533 1483