Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0851 ATGGGAGCACCGAAGAAAAGCGCGGTTAGGGTTTCAGAGGACACTGATGAATTGGTTCGTGTTCCGTTACAAGCTATTCTCTTAGCCGATAGCTTCACCACAAAGTTCAGACCTATCACTCTTCAACGCCCTAAGGTGTTGTTGCCACTGTTGAATGTTCCTATGATAAATTACACCTTGATGTGGCTCGAATCTGCTGGTGTAGAAGAGGTTTTTGTTTTCTGTTGTGCTCATTCCAAACAGGTCATTAGCTATTTGGAGAAAACTCAGTGGCTTTCTCAACCCAATTTTACTGTAACAACTATCGAGTCGCATAATTGTGTCAGCGCAGGAGATGCGCTTCGCATAATATATGAGCGCAATGTGATACATGGAGACTTTGTCCTTATCAGCGGTGATACCATAAGCAACATGTCACTTACTGCGGCACTTAGAGAGCATAAAGAAAGGAAGAAGAAGGATAGTAATGCTGTGATGACCATGGTCATTAAACGGTCAAAACCTAATCCAGCAATCCGTCAGTCTCGACTTGGTACTGATGAACTTTTCATGGCCATCGATCCCGATACCAAGCAACTTTTGTATTATGAGGACAAGGCAGATAATTCAAAAGCCATTTTACATCTTGAGAAGTCATTGCTTGCTGATAACCCTTCCCTCTCTTTGCACCATGATAAGCAGGATTGTTACATTGACATCTGCTCGCCAGAAGTCCTTAGTCTATTTACAGACAATTTTGACTACCAACATATACGGCGCCATTTTGTCAAAGGGTTGCTCGTTGATGATTTAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCGGACTATGCTGCAAGGATTGATAATTTTCGAAGCTATGATACTGTCAGCAAGGATATAATTCACAGATGGACATATCCATTGGTGCCAGATGTTATGAATTTTGGCAATACAGCTACTAAACTTGAACGGCAAGGAATGTATCGTGCTTCAGAAATATCACAATCACAATCTGCTGTTATTGGCCCTTTCACGTCTATAGGATTTGGGACCAAAATTGGAAATAACACTAAAATTTCAAGTTCTGTTGTTGGAGAAGGATGTAAAATTGGGTCAAATGTTTACATAGAGGGATGCTATATATGGGACAATGTCACCATAGAAGATGGCTGCAAACTTAGGAATGCAGTTGTATGTGATGGGGTGACTATGAAATCAGGAGCTGTCCTGGAACCTGGCGTTATTTTGTCTTTCAAGGTTGTAGTTGGGCAGGGGTTTGTTGTTCCTTGTTATTCAAAAGTATCTCTGTTACAGCAGCCAGTTGAGGAAGATAGCGACGAGGAGCTTGAGTATGCTGACAGTACTAGTGCCATCACAAGCAAAGTGGATACGTCAGATGAAGAGGTTGCATCCCAAGTATTGGACACACATTTACATTCTGCATCACAGCTAGGTGTGGGTGGGGTTGGTTATATTTGGTCCAAATGTGAAGGAGGCCATGAAGAGGAATGGAGGCACTCAGTGGCGCCTATTCCTGCAGATAAAATTTCTGAGGCAATGAAAATCATGGAAGATGAGTTGGAGTTAACTTATGATGGCAGTATTCTCCCACCTTCTGGAGAGCTCAAACCTGATTGTAATGATTCAGAGGATGATGATAATGAAGATTCTAGAGACGACTCTTATTTTGAGAAAGAGGTAGAAGCAACTTTTCTCAGGGCTGAGCAAGAAAACATACAAGAAGGCCATTTGATCTTAGAAGTTAACTCTTTGAAGTTGTCATACAATAAGGTAGCTGCTGACTGTGCTGGAGCTGTATTTTATGCTCTGATGAAGTATGCTTTAGACACCCCCCATAGTTCAGCTGATAGCTTGATGCAGAATGTTAAGGACATACTTAGAAAATGGAAAAATGTTCTTAGACCCTATCTGACTGATATAGATGACCAGATTGAAGTAATACTAAAATTTGAAGAAATGTGTTCAGAATCTGCAAAGGCGTTTGCTCCATTGTTCACAAGCATTTTGCACTTCATGTATGAGGAAGATATTGTAGAAGAAGATGCTATTTTAAATTGGGATGATGAGAAGAAAGATGCCGATGATTCAGATAAAGTCTTTGTTAAGCAGGCACAAGGATTGATTCAATGGCTAAGAAATGCATCCGAAGAAGACGACGATGAGGAAGAATAA 2178 0.4077 MGAPKKSAVRVSEDTDELVRVPLQAILLADSFTTKFRPITLQRPKVLLPLLNVPMINYTLMWLESAGVEEVFVFCCAHSKQVISYLEKTQWLSQPNFTVTTIESHNCVSAGDALRIIYERNVIHGDFVLISGDTISNMSLTAALREHKERKKKDSNAVMTMVIKRSKPNPAIRQSRLGTDELFMAIDPDTKQLLYYEDKADNSKAILHLEKSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHIRRHFVKGLLVDDLMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGMYRASEISQSQSAVIGPFTSIGFGTKIGNNTKISSSVVGEGCKIGSNVYIEGCYIWDNVTIEDGCKLRNAVVCDGVTMKSGAVLEPGVILSFKVVVGQGFVVPCYSKVSLLQQPVEEDSDEELEYADSTSAITSKVDTSDEEVASQVLDTHLHSASQLGVGGVGYIWSKCEGGHEEEWRHSVAPIPADKISEAMKIMEDELELTYDGSILPPSGELKPDCNDSEDDDNEDSRDDSYFEKEVEATFLRAEQENIQEGHLILEVNSLKLSYNKVAADCAGAVFYALMKYALDTPHSSADSLMQNVKDILRKWKNVLRPYLTDIDDQIEVILKFEEMCSESAKAFAPLFTSILHFMYEEDIVEEDAILNWDDEKKDADDSDKVFVKQAQGLIQWLRNASEEDDDEEE* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0851 725 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Lan4g0851 725 CDD LbH_eIF2B_epsilon 342 419 - -
Lan4g0851 725 SMART 542_3 632 719 IPR003307 GO:0005515
Lan4g0851 725 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 724 - -
Lan4g0851 725 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 303 IPR029044 -
Lan4g0851 725 SUPERFAMILY ARM repeat 558 716 IPR016024 -
Lan4g0851 725 Gene3D Hexapeptide repeat proteins 317 433 - -
Lan4g0851 725 ProSiteProfiles W2 domain profile. 552 723 IPR003307 GO:0005515
Lan4g0851 725 Pfam eIF4-gamma/eIF5/eIF2-epsilon 644 723 IPR003307 GO:0005515
Lan4g0851 725 Gene3D - 545 724 - -
Lan4g0851 725 SUPERFAMILY Nucleotide-diphospho-sugar transferases 20 385 IPR029044 -
Lan4g0851 725 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058|GO:0016779
Lan4g0851 725 CDD W2_eIF2B_epsilon 558 717 IPR044123 GO:0005085|GO:0031369
Lan4g0851 725 SUPERFAMILY Trimeric LpxA-like enzymes 266 428 IPR011004 -
Lan4g0851 725 MobiDBLite consensus disorder prediction 527 555 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0851 1 717 Eukaryotic Initiation Factors Gene Family AT2G34970 62.017 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0851 K03240 - gmx:100784894 1215.68