Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0845 ATGGCATCATCTGAGCAAAACGACACAGTTTCCGCCGAACAAGACATGGAAGACGACGACGACGAATCTCACGACGGCTTAATCGAAGAAGAATATGAAGAAGAATTCGACGACGACGTTTTACCTAATCACGATGATAATCAACCTTCCACCTCCTCCGCCCTCGCCGTCACCGTCGCCGTCCCACCTCCGATCTCACCGGCAACTACCTCCGTCTCTGACTCAAAACGCTACCAAATCCAAGAGAAAAAGCCAATTGACGATTCCAGAAGACTCTTTCAGCGTCTTTGGACCGATGAGGATGAGATTGAATTGTTGCAAGGCTTCCTCGATTACACGTCGCAGCGTGGATCCTCTCATCACAATGATACCGCTTTGTTCTACGATCAGATGAAATCGAAGTTTCAGATTGATTTCAACAAGAACCAGCTCGTTGAGAAGATTCGAAGGTTGAAGAAGAAGTATCGTAATGTTCTCAACAAAATCAGCTCCGGTAAGGATTTTTCGTTCAAAAGCGCTCATGATCAAGCCACGTTCGAAATCTCGCGTAAGATCTGGAGAAATATTGGTCAGATCAGCGGTGGTGTTGTCGTTGATGATAATGCTTTGGATGAAGATGAAATCAATCTTAACCCCATTCAAAACCCTAATAACCATTACCCTAACCCTAACATTAATCTCAATTTAGTTCACTCGGTGGTGATGCTTGGGAATTCAGGGGAGAAGAAGAGTACTCCTTCAAGGAAGAGGTCACGGCCGCAATCAGCTATGATGAGGATCGATGAGAAACCACGCGAGTTATTGAATGATGGATTAGGATTAGGATCAGGATCGGGGTTGAATTTGAATTTAAACAAGGATCATAATTATATAAGTAATTCAGCTGCTACTGCAACGGTTGCTGCTGATGTAAACAATAATAGGAATCATGAGAATAATTGTAATAGTGGGCAACAGCATAGTAGTAGCAGTAATATACCTGGTTTGATTGAAGAGACGGTGAGAAGTTGTTTGTCACCTGTGTTGAAAGAGTTGATGGGTAGTAGTGTCATGGGACGAGGGGCGTTTGGAATTGAAGGGTTCGGTTCGATGAATTCGATTCCAATGATGCCATTGAGTTATTTGGGATTGGGGAGTGGTGGAGATGCGGCAGATGAGAAGTGGAGGAAGCAACAGATCTTGGAGTTGGAAGTTTACGCGAGACGGTTGGAGCTGGTGCAGAATCAGATCAAGGCTGCTTTGGATGAGTTGAGATCAGCCGGAGGAGGATGA 1272 0.4465 MASSEQNDTVSAEQDMEDDDDESHDGLIEEEYEEEFDDDVLPNHDDNQPSTSSALAVTVAVPPPISPATTSVSDSKRYQIQEKKPIDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQMKSKFQIDFNKNQLVEKIRRLKKKYRNVLNKISSGKDFSFKSAHDQATFEISRKIWRNIGQISGGVVVDDNALDEDEINLNPIQNPNNHYPNPNINLNLVHSVVMLGNSGEKKSTPSRKRSRPQSAMMRIDEKPRELLNDGLGLGSGSGLNLNLNKDHNYISNSAATATVAADVNNNRNHENNCNSGQQHSSSSNIPGLIEETVRSCLSPVLKELMGSSVMGRGAFGIEGFGSMNSIPMMPLSYLGLGSGGDAADEKWRKQQILELEVYARRLELVQNQIKAALDELRSAGGG* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0845 423 MobiDBLite consensus disorder prediction 238 262 - -
Lan4g0845 423 MobiDBLite consensus disorder prediction 11 41 - -
Lan4g0845 423 PANTHER BNAANNG10740D PROTEIN 1 421 - -
Lan4g0845 423 PANTHER BNAANNG10740D PROTEIN-RELATED 1 421 IPR007592 GO:0006355
Lan4g0845 423 MobiDBLite consensus disorder prediction 1 55 - -
Lan4g0845 423 MobiDBLite consensus disorder prediction 243 262 - -
Lan4g0845 423 Coils Coil 396 420 - -
Lan4g0845 423 Coils Coil 141 161 - -
Lan4g0845 423 Pfam Protein of unknown function, DUF573 93 186 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0845 Lan-Chr4 10393323 10395207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0845 35 423 GeBP Transcription Factor Family AT5G28040 45.854 6.68e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lan4g0845 DUF573 2.2e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0845 - - gmx:100779712 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0845 4 10393323 10395207 Lan2g0313 2 2718778 2720605 LSH
Lan4g0845 4 10393323 10395207 Lan16g1105 16 18173381 18175092 LSH