Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0839 ATGGGAAAGGCAGGGAAATGGATTAGAAACTTTCTTCTAGGGAATAAGGAAGAGAAGTACAAGAAGATTGATACATTTTGCTCTGAGAATATGAGTGCCAGCATGATGGATAGTCAGATTGTAAGTCCTAATGTGAAGCGTAGATGGAGTTTCGGAAGATTGAGAGGTGGAAGTGAAAGAAAGACTAGCATGCTAGCAGGGCATAAATTTTCTATATCTTTTGACTCAGGTGATTCTGCCAGACTGCAAATCCAAGCCCTGTTGGAAACTCAAGGTTCTAAGAGTCTTCCAACAGCACTACCACAGGTTTCTAGATACAGAAGACATAAAACTGCAGCTGCTATAAAGATTCAAGCTGGCTTTCGCTCATATTTGGCAAGGAGAGCATTGCATGCTTTAAGGGGATTAGTCAAGTTACAGGCACTGGTAAGGGGTCACCTTGTAAGGAAACAGACAACTGCTACACTGCGTGGCATGCATGCATTGATGGCGATCCAAGTTAGAACCCGAATTCACAGAATTCAGATGGTTGAGGAAGCAAATCTTCATGGGAAACAGCCTCTGCAACATAGAGAAGTTCCTCGCCACAAGGGTCTCACAAGAAAAAATAAACATTCAAAGGGTATGAGTATGGATGAAATGCTGGAAGCTTTGAAAAGCAGAGGTTCCCCTGTACATCATTCACATGCAAAGAGCATGGAGCATGATCACATGACATTCTATTCAAACCGTATGTCAGTTTCAAAACGAAAACATCAATACAAGGAGAATACTTTAAACAAAGCAGCAAACAGCCAAGAAAACTACAGGCCCATCATGTCTGAATCAAATCCAACAACAATAGCATTATCAACTTCTGAGCGCCATGAAATGTCTCACAACCAATCATGGTCACCAAGTTACATGAGCAAGACACAATCTTCAAGAACAAAAGCAAGGTCTCTTAGTGAACCAAAACAACGACCCAAAAAGGGAATGAGGCACAAAAATAAGTCTATAGAATCTACCGATGATCTTAGTACCTCACTTAATGGTCCAAGGCACAGTGTGTCCTCTGAGTCGTCACACTTCAATAGAAGAAGCTTTGACCAATGGATTACTAACCTCTATGGGTCAACGAAGGATGGAAGGCACGAATCCCTTGGCAGCATCACGGTTAATAGTGACTCATACTATTGA 1179 0.4173 MGKAGKWIRNFLLGNKEEKYKKIDTFCSENMSASMMDSQIVSPNVKRRWSFGRLRGGSERKTSMLAGHKFSISFDSGDSARLQIQALLETQGSKSLPTALPQVSRYRRHKTAAAIKIQAGFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRTRIHRIQMVEEANLHGKQPLQHREVPRHKGLTRKNKHSKGMSMDEMLEALKSRGSPVHHSHAKSMEHDHMTFYSNRMSVSKRKHQYKENTLNKAANSQENYRPIMSESNPTTIALSTSERHEMSHNQSWSPSYMSKTQSSRTKARSLSEPKQRPKKGMRHKNKSIESTDDLSTSLNGPRHSVSSESSHFNRRSFDQWITNLYGSTKDGRHESLGSITVNSDSYY* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0839 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 152 IPR027417 -
Lan4g0839 392 MobiDBLite consensus disorder prediction 285 313 - -
Lan4g0839 392 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Lan4g0839 392 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Lan4g0839 392 Pfam Protein of unknown function (DUF4005) 277 348 IPR025064 -
Lan4g0839 392 MobiDBLite consensus disorder prediction 285 357 - -
Lan4g0839 392 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Lan4g0839 392 Gene3D - 107 162 - -
Lan4g0839 392 SMART iq_5 132 153 IPR000048 GO:0005515
Lan4g0839 392 SMART iq_5 109 131 IPR000048 GO:0005515
Lan4g0839 392 MobiDBLite consensus disorder prediction 373 392 - -
Lan4g0839 392 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 379 - -
Lan4g0839 392 Pfam IQ calmodulin-binding motif 111 130 IPR000048 GO:0005515
Lan4g0839 392 Pfam IQ calmodulin-binding motif 137 151 IPR000048 GO:0005515
Lan4g0839 392 MobiDBLite consensus disorder prediction 336 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0839 Lan-Chr4 10353924 10357401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0839 1 322 IQD Protein Family AT4G14750 34.557 4.94e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0839 - - lang:109345769 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0839 4 10353924 10357401 Lan16g1115 16 18249071 18251638 LSH