Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0831 ATGCATTCTTATTATCACATTTTTCATTCATTCATTCATTCTCGTGATTCAATGGCTGCAAATGAAGGAGGAAAGAAAAGTATTAACTTTTACGAGGTTTTGGGATTGAAGAAGAATTGCACCCATTCTGAACTCAGAAATTCTTACAAAAAACTTGCACTCAAATGGCACCCAGATCGTTCTTCTTCTTCTGCAAATGCAAACTCCATTGAAGAAGCTAAGAACAAATTCCAAGCAATTCAACAAGCCTATTCTGTTTTATCTGACGCCAAGAAAAGAACCTTGTACGATGTAGGAGTCTATGATAGCAATGTTGATGATGATAAAAACGGTCCAGGAGATTTCTTTACCCAATTGGCAAGAATGATACGACAAACAAAACCCTTCCGAAGTTGGAGGGAGAGGGAAGAGGAATTGCAGCGACTAAAAGATATGTGTGAAACAGATATTCTGTCATATGAAAGAACCTCTCACACTTGTTCTGCTTCAAATAAACGCAATTCCTCAGAGATGAATTTTGGGAAGGTTGATTCAGACTACCAGAACTTCAGTTCAGGGGCGGAGAGCAAGGGGGAACAAGGAGAGATTCCGGAAGGAGATAGTAGTAGACGTAGGAGCGGTACTAAGCAGAAAACCTCATCCGGTCATGATGTTTCCAGTGATGACTATTCCGACATTTATACAAAGTGA 690 0.3971 MHSYYHIFHSFIHSRDSMAANEGGKKSINFYEVLGLKKNCTHSELRNSYKKLALKWHPDRSSSSANANSIEEAKNKFQAIQQAYSVLSDAKKRTLYDVGVYDSNVDDDKNGPGDFFTQLARMIRQTKPFRSWREREEELQRLKDMCETDILSYERTSHTCSASNKRNSSEMNFGKVDSDYQNFSSGAESKGEQGEIPEGDSSRRRSGTKQKTSSGHDVSSDDYSDIYTK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0831 229 SMART dnaj_3 28 92 IPR001623 -
Lan4g0831 229 Gene3D DnaJ domain 13 104 IPR036869 -
Lan4g0831 229 PANTHER PUTATIVE, EXPRESSED-RELATED 26 223 - -
Lan4g0831 229 MobiDBLite consensus disorder prediction 157 189 - -
Lan4g0831 229 MobiDBLite consensus disorder prediction 193 218 - -
Lan4g0831 229 ProSiteProfiles dnaJ domain profile. 29 100 IPR001623 -
Lan4g0831 229 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 26 223 - -
Lan4g0831 229 MobiDBLite consensus disorder prediction 157 229 - -
Lan4g0831 229 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
Lan4g0831 229 SUPERFAMILY Chaperone J-domain 26 120 IPR036869 -
Lan4g0831 229 Coils Coil 70 90 - -
Lan4g0831 229 PRINTS DnaJ domain signature 31 49 IPR001623 -
Lan4g0831 229 PRINTS DnaJ domain signature 49 64 IPR001623 -
Lan4g0831 229 PRINTS DnaJ domain signature 72 92 IPR001623 -
Lan4g0831 229 Pfam DnaJ domain 29 97 IPR001623 -
Lan4g0831 229 CDD DnaJ 29 89 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0831 Lan-Chr4 10294329 10297766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0831 31 97 C2H2 Transcription Factor Family AT1G74250 47.761 8.54e-12 62.4