Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0816 ATGGATGAGGTTTTGGAGAAGTGGACTTCGTTTTGTAGCATCAGCTTCTTCTGTTTATTCTCACCACAACGACTTTATTACGGTTTGCACAGTCCATGTCACAAAAAACGTAAGGAAGATTTATTCCTTTTATGCATTTTTCGTCAGGGAAGATCTAAAGCAGCGCTAAGAACACGTCCTTCTGTAATGGACGCATATTCCTCTGGAGAAGAAGTGGTTGTTAAGATAAGAAAACCATATACAATAACAAAACAAAGGGAACGATGGTCAGATGAGGAGCATAATAGGTTTTTGGAAGCCTTGAAGCTATACGGGCGAGCATGGCAGCGCATAGAAGAGCACATAGGAACAAAGACTGCTGTGCAAATCAGGAGTCACGCTCAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCCTCGTAAAGGGTATTTCAATCGGACAAGCCCTTGATATAGAAATTCCCCCTCCACGGCCTAAAAGAAAACCAAACAACCCTTATCCCCGTAAGACCAATGTTAGTTCCCCAACAATTAATAGTGGATCAAATCAAGGAAAGCTTCTCATTTCAGCTGTATCTCCACATGGTAAAGAAGCGCTGGACTTGGAGAAAGAACCGCTTCCAGAGAAGAACAATGAAGATGAAAGACCAACAACTGTAAACGAAAATACGGATGAAAACTACTCAAAAACATTGACTATTATCCAGGAGGCACCCTGTTCATCTGTATCTTCAGCAAATAAGAGTTCAATATCAGTGTCAGTGCCACTGACAAATTCATACGCCTTAAGGGAATTTAGGCCATCAATGAAAGAGGTAGTAACTCGAGATGAAACAAATGAATCTTTCGTCACTGTTGAACTTGGAAATCAGAAGTTGGAGATAAATGGTTGCAAAAACACACAACAGACTAATTTCACCTCTGCTGCCTCTGAATTGGAGAGTTCTGATGTTTCACAAGCAAAATCAGTTCAAATTGAGAACAAAGATTGTCTTAATTGTGGACTAACAATAGATGGGATGCAAGGCAATCAAAATTACCCAAGACATATCTCTGTGCAAGTTGTTGATGGAAATCACGAAACTAGTACTCAAAATCCATCCCAAGATAAGTTGTTTCGAGACTCCATGTTTCATCCAGCAGAAGTGGTTAGTGGGCAACATAATATTTTCACCATTTCAGCTCCATCAAACACAAGTGAAAATCAAAGTAACAATTCACAGTCCTCTACTCATCAATCGTTTCTTCATTGTCCTCCTCTCCCACAACATAATCATGATGATTACCAGTCATTTCTTCAGATGTCCTCCACATTTTCAAATCTTATTGTCTCTACCTTGCTGCAAAACCCTGCAGCCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCTATGCTAATAATTTAGAAACTTCATCCAATTCTCCGGTGTGTCCTCAAGGAGCATTTGCATCTAGACAAGTTGGCTCTCCGCCAAGCGTGGCTGCTATTGCAGCTGCTACCGTTGCTGCTGCAACTGCATGGTGGGCAGCCCATGGAATGCTTCCGTTGTGTACTCCACTCCATACTGCTTTTCCATGTCCTCCTTCATCAGCCGATGTGGTTCAGTCAATGAATGTTGGTGAAGCACCACCAGAAACAAAACAGGGAGAGATCACTGTACAAAATCCTCCTCTGGAAGATCAGATGTTGGATCTTAACTCAAAAGCTCAGCAAGCTCAACAACATTCACCTTCTAAGTTACTGGTTGGTTCACCATCCGAGTCTGAGGAGAGTGGAGTTGCAAAGTTAAATGCTTCCTCAAAGGCTACAAATCATGGGATGAACCATGGGATCTCTGAGCATGTTGATTCGAACAAAATAAAGGGCAGAAAACCGGTTGATCACTCCTCATGTGGTTCCAACACAGGCTCTAGCTGTGAGGAGACTGATGCACTAGAGAAGGATGAGAAAGAAAGGCAAGAGCCTGAACCTGAAACACATGCTTTGAACCATTTAGCTGCCGACCCTAGCAATCGGTGTGCTACTAATAATAGAAGCTTTAGCTACCTTACAGATTCCTGGAAGGAGGTCTCTGAAGAGGGGAGACTAGCCTTTCAGGCTCTATTCTCAAGACAAGTGTTGCCGCAAAGCTTTTCGCCTCCGCAAGGCATAGACTACAAAGATGAAGAAGATCTTGAGAGTAAGAAATGCAGTTCGAATAGTAAACCGATGCAGAAAAGCCTGTCATCTGTAGAAAATAACACTAACAGTAGTGAGGAGGGATTGCTAACCATAGGTCTTGGACAAGGAAGGCTCAAAACTCGCCGAACCGGGTTTAAACCTTACAAAAGGTGTTCAGTAGAGGCCAACGAAAACAAGGTAGGAAACCAAGGTGAAGAGAAAGGTCCTAAAAGAATACGCATAGAAGGGGAGGCTCCAATTTGA 2427 0.4256 MDEVLEKWTSFCSISFFCLFSPQRLYYGLHSPCHKKRKEDLFLLCIFRQGRSKAALRTRPSVMDAYSSGEEVVVKIRKPYTITKQRERWSDEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGISIGQALDIEIPPPRPKRKPNNPYPRKTNVSSPTINSGSNQGKLLISAVSPHGKEALDLEKEPLPEKNNEDERPTTVNENTDENYSKTLTIIQEAPCSSVSSANKSSISVSVPLTNSYALREFRPSMKEVVTRDETNESFVTVELGNQKLEINGCKNTQQTNFTSAASELESSDVSQAKSVQIENKDCLNCGLTIDGMQGNQNYPRHISVQVVDGNHETSTQNPSQDKLFRDSMFHPAEVVSGQHNIFTISAPSNTSENQSNNSQSSTHQSFLHCPPLPQHNHDDYQSFLQMSSTFSNLIVSTLLQNPAAHAAASFAATFWPYANNLETSSNSPVCPQGAFASRQVGSPPSVAAIAAATVAAATAWWAAHGMLPLCTPLHTAFPCPPSSADVVQSMNVGEAPPETKQGEITVQNPPLEDQMLDLNSKAQQAQQHSPSKLLVGSPSESEESGVAKLNASSKATNHGMNHGISEHVDSNKIKGRKPVDHSSCGSNTGSSCEETDALEKDEKERQEPEPETHALNHLAADPSNRCATNNRSFSYLTDSWKEVSEEGRLAFQALFSRQVLPQSFSPPQGIDYKDEEDLESKKCSSNSKPMQKSLSSVENNTNSSEEGLLTIGLGQGRLKTRRTGFKPYKRCSVEANENKVGNQGEEKGPKRIRIEGEAPI* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0816 808 MobiDBLite consensus disorder prediction 166 183 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 392 419 - -
Lan4g0816 808 Gene3D - 88 135 - -
Lan4g0816 808 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 84 133 IPR006447 GO:0003677
Lan4g0816 808 ProSiteProfiles SANT domain profile. 84 135 IPR017884 -
Lan4g0816 808 PANTHER SWI/SNF COMPLEX-RELATED 64 792 - -
Lan4g0816 808 Pfam Myb-like DNA-binding domain 86 129 IPR001005 -
Lan4g0816 808 MobiDBLite consensus disorder prediction 568 612 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 568 671 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 642 662 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 783 808 - -
Lan4g0816 808 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Lan4g0816 808 MobiDBLite consensus disorder prediction 200 220 - -
Lan4g0816 808 SMART sant 85 133 IPR001005 -
Lan4g0816 808 CDD SANT 88 131 IPR001005 -
Lan4g0816 808 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Lan4g0816 808 MobiDBLite consensus disorder prediction 392 417 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 613 627 - -
Lan4g0816 808 SUPERFAMILY Homeodomain-like 80 136 IPR009057 -
Lan4g0816 808 MobiDBLite consensus disorder prediction 710 761 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 200 226 - -
Lan4g0816 808 PANTHER PROTEIN LHY 64 792 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 151 183 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 788 808 - -
Lan4g0816 808 MobiDBLite consensus disorder prediction 732 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0816 Lan-Chr4 10166265 10173128 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan4g0816 Myb_DNA-binding 2.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0816 K12133 - gmx:100271888 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0816 4 10166265 10173128 Lan11g0607 11 4858581 4866572 PCT
Lan11g0607 11 4858581 4866572 Lan4g0816 4 10166265 10173128 PCT