Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0814 ATGGCTAAGAAATTTGTTGATAGTGAAGTTATCTACAAAGAATCAAAAGAACTAGAAGATGAAGAAGCTTTTTCATATGCAACACAACTTGGATTCTCAATAGTTCTATCTATGTCACTACAATCAGCAATTGAGCTTGGTGTTTTTGATATCTTACAAAAAGCTGGTCCAAATGCACAGCTTTCTGCTAAGCAGATTGCATCACAGATTTCTTGCAATAATCCAGAAGCAGCTTCTATGTTAGATCGTGTTCTTGGTCTCTTTGCATCTCATGATATACTTAAATGTAGTGTCATTCCTCTTGATCAAAAGCTTGGATCTTTTCAGAGACTCTATAGTATGGCTCCTGTGGCTAAATTCTTTGCAAGTGATTCTGATGGTTTTTCATTAGGACCCTTGATGGCTTTGATTCAAGATAATATCTTCCTAAAAAGCTGGTCCCAATTGAAAGATGCAATTATGGAAGGAGGTGTTCCATTTGATAGGGCTCATGGCACACAAGTCTTTGAGTATCAAAGCTTGGACTCAAGATACAATGATGTTTTTAATAATGCAATGATCAACCAAACTACTATAGTTATGAAGAAGGTTCTTGAAATCTATAAAGGTTTTGAGGGCATAAAAAAGCTTGTGGATGTTGGAGGAGGTCTTGGTATAAGTATTAACTTGATCACTTCCAAATACCCTCATATTAAGGGTATCAATTTTGACTTACCTCATGTCATAGAACATTGTCCTTCCTATCATGGAGTGGAACATGTTGCTGGAGATATGTTTCAAAGTGTGCCTAAAGGAGATGCCATATTTATGAAGTGGATACTTCAATGTTGGAGTGATGATGAGTGCTTGAAGTTGTTAAAGAAGTGCTATGAAGCTATTCCTGATGATGGAAAAGTGATTGTGGTGGAAGCACTTCTTGGTGTTATGCCTGAGAATAATGCTGCTTGGAAAGCTATTTCACAAACTGATATTTTGTTAATGGCTCAATCTCCAAGAGGGAAAGAGAGAAGTGACAAAGAATACATGGAATTAGCCATTAGAGCTGGATTTAGTGGCATTAGATATGAATGCTATGTACGTATGTTTTGTGTTATGGAGTTCTTCAAGTAG 1110 0.3658 MAKKFVDSEVIYKESKELEDEEAFSYATQLGFSIVLSMSLQSAIELGVFDILQKAGPNAQLSAKQIASQISCNNPEAASMLDRVLGLFASHDILKCSVIPLDQKLGSFQRLYSMAPVAKFFASDSDGFSLGPLMALIQDNIFLKSWSQLKDAIMEGGVPFDRAHGTQVFEYQSLDSRYNDVFNNAMINQTTIVMKKVLEIYKGFEGIKKLVDVGGGLGISINLITSKYPHIKGINFDLPHVIEHCPSYHGVEHVAGDMFQSVPKGDAIFMKWILQCWSDDECLKLLKKCYEAIPDDGKVIVVEALLGVMPENNAAWKAISQTDILLMAQSPRGKERSDKEYMELAIRAGFSGIRYECYVRMFCVMEFFK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0814 369 PIRSF O-mtase 6 369 IPR016461 GO:0008168
Lan4g0814 369 Pfam Dimerisation domain 38 88 IPR012967 GO:0046983
Lan4g0814 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 18 369 - -
Lan4g0814 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Lan4g0814 369 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
Lan4g0814 369 Gene3D Vaccinia Virus protein VP39 122 369 IPR029063 -
Lan4g0814 369 Gene3D - 5 121 IPR036388 -
Lan4g0814 369 PANTHER O-METHYLTRANSFERASE 18 369 IPR016461 GO:0008168
Lan4g0814 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 367 IPR029063 -
Lan4g0814 369 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0814 Lan-Chr4 10139126 10141551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0814 17 369 Monolignol Biosynthesis Gene Families AT5G54160 48.451 1.71e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0814 K13066 - gmx:100803633 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0814 4 10139126 10141551 Lan11g0610 11 4895070 4897493 PCT
Lan4g0814 4 10139126 10141551 Lan9g1018 9 17197841 17201293 PCT
Lan11g0610 11 4895070 4897493 Lan4g0814 4 10139126 10141551 PCT
Lan9g1018 9 17197841 17201293 Lan4g0814 4 10139126 10141551 PCT