Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan4g0809 | ATGGGGAAGAAAGGAGGTAGTAGTTCATGGTTAAGTGCTGTCAAAAGGGTATTCAGATCTCCAACTAAAGACACTAATAGTAACAAAAAAAGTAGCACAAGAAGAGAGGTTAATGACCAAGAACAACAACAAGAACAAGAACAAGACAAGAAGAGAGATAAAGGAAGATGGTTTTTTAGAAAACCTACAAATCATGAAACTATGAGTACTAAACAAACACTAACAAAGGTTGTTGAAAGTGAAGCTTCAACTATAATAGAACAAGTGCCAAGGTTGAAGCATGAAGCTGCTATTGTGATTCAAACTGCTTTCAGAGGATATCTAGCAAGAAGAGCACTTGGTGCACTTAAGGGGCTAGTGAAGTTGCAAGCATTAGTAAGGGGTCACAATGTTAGGAAGCAAGCAAAGATGACCCTTCGTTGCATGCAAGCGTTGGTTCGAGTCCAAGCTCGGTTGCTCGATCAACAGCGTACAAGGTTTTCACATCAAGTTAGTAGCGGAGCATCCACTTTCAGCGACACCAATGTGCAGTATCTTCAGGACATTTCAGATCGGAAATCACTAACAAGAGAGGGAAGTAGCAATGCAAGTGATTGGGATGAACATCCACACACAGTTGAAGAAATTAAAACCATGTTGCAGAAGAGAAAAGAAGCAGCTATGAATCGAAACAAGTCCTCGTCTCAAGCTTTTCCTCAACAGGGTACTACAAAGGCATGGGAGAATAAAGGAAGAGTCTCAAGTAATCAAAGAGATCTCGTTAAGACGGTGGAAATTGACACCTCTCAACCTTATTCATATTTCGGATCCAATACTTACAGAAGATCACATCCAAATTATCAATATAACCCTCAGTCGCACCAACATCAAAGGCATTCAATTGCTATCCAAAATGGACCACTTCACCAATCCCCTGTAACCCCATCTCCGGGGAAATCAAGAACGATCCAAGTCCGATCGGCTAGCCCTCGTTGTGGTAGAGAAGATATAAGCTACCAAACCTCTCAAACACCAAGCCTAAGATCCAATAATAATTATCATTGTAAAGGAAATGTGTACTCAAGTAGCAGGGCTGGAACAAGTAATGGTACTAGTGGTGGTGTAACATACCCGAATTACATGGCTACAACAGAATCGGCCAAGGCGCGAAATCGATCAAAGAGTGCACCTAGGCAAAGGGCATTGACACCGGAGAAGGACAGAGTTGGGTCAGCAAAGAGAAGACTTTCGTACCCGGCTCCAGACCCTTGTTATAATGTAGGAATAAGGTATGGAAATAATTATAGGCATAGTTTAAGGAGTCCAAGCTTAAGGAGTGTGAGTAGGTCACATTTTGGGTTGGAGCAATATTCCAACTACTCTTCTTGCTACACTGATAGTCTTGGTAGTGAGATTTCTCCATCTTCAACTAGTGACCTTAAGTGGTTTAAATGA | 1434 | 0.4156 | MGKKGGSSSWLSAVKRVFRSPTKDTNSNKKSSTRREVNDQEQQQEQEQDKKRDKGRWFFRKPTNHETMSTKQTLTKVVESEASTIIEQVPRLKHEAAIVIQTAFRGYLARRALGALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARLLDQQRTRFSHQVSSGASTFSDTNVQYLQDISDRKSLTREGSSNASDWDEHPHTVEEIKTMLQKRKEAAMNRNKSSSQAFPQQGTTKAWENKGRVSSNQRDLVKTVEIDTSQPYSYFGSNTYRRSHPNYQYNPQSHQHQRHSIAIQNGPLHQSPVTPSPGKSRTIQVRSASPRCGREDISYQTSQTPSLRSNNNYHCKGNVYSSSRAGTSNGTSGGVTYPNYMATTESAKARNRSKSAPRQRALTPEKDRVGSAKRRLSYPAPDPCYNVGIRYGNNYRHSLRSPSLRSVSRSHFGLEQYSNYSSCYTDSLGSEISPSSTSDLKWFK* | 478 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan4g0809 | 477 | Pfam | IQ calmodulin-binding motif | 120 | 136 | IPR000048 | GO:0005515 | |
| Lan4g0809 | 477 | Pfam | IQ calmodulin-binding motif | 94 | 112 | IPR000048 | GO:0005515 | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 13 | 27 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 28 | 61 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 299 | 345 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 223 | 247 | - | - | |
| Lan4g0809 | 477 | ProSiteProfiles | IQ motif profile. | 93 | 121 | IPR000048 | GO:0005515 | |
| Lan4g0809 | 477 | ProSiteProfiles | IQ motif profile. | 117 | 144 | IPR000048 | GO:0005515 | |
| Lan4g0809 | 477 | Coils | Coil | 30 | 54 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 378 | 410 | - | - | |
| Lan4g0809 | 477 | Gene3D | - | 91 | 153 | - | - | |
| Lan4g0809 | 477 | PANTHER | PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 | 43 | 233 | - | - | |
| Lan4g0809 | 477 | PANTHER | PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 | 237 | 474 | - | - | |
| Lan4g0809 | 477 | SMART | iq_5 | 92 | 114 | IPR000048 | GO:0005515 | |
| Lan4g0809 | 477 | SMART | iq_5 | 115 | 136 | IPR000048 | GO:0005515 | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 299 | 320 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 222 | 247 | - | - | |
| Lan4g0809 | 477 | PANTHER | IQ-DOMAIN 5-RELATED | 43 | 233 | - | - | |
| Lan4g0809 | 477 | PANTHER | IQ-DOMAIN 5-RELATED | 237 | 474 | - | - | |
| Lan4g0809 | 477 | Pfam | Protein of unknown function (DUF4005) | 322 | 431 | IPR025064 | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 184 | 205 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 392 | 406 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
| Lan4g0809 | 477 | MobiDBLite | consensus disorder prediction | 327 | 345 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan4g0809 | Lan-Chr4 | 10113548 | 10116495 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan4g0809 | 1 | 477 | IQD Protein Family | AT1G01110 | 45.439 | 6.14e-124 | 370 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan4g0809 | - | - | lang:109345736 | 920.998 |