Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0808 ATGAGTACTAAACAAACACTAACAAAGGTTGTTGAAAGTGAAGCTTCAACTATAATAGAACAAGTGCCAAGGTTGAAGCATGAAGCTGCTATTGTGATTCAAACTGCTTTCAGAGGATATCTAGCAAGAAGAGCACTTGGTGCACTTAAGGGGCTAGTGAAGTTGCAAGCATTAGTAAGGGGTCACAATGTTAGGAAGCAAGCAAAGATGACCCTTCGTTGCATGCAAGCGTTGGTTCGAGTCCAAGCTCGGTTGCTCGATCAACAGCGTACAAGGTTTTCACATCAAGTTAGTAGCGGAGCATCCACTTTCAGCGACACCAATGTGCAGTATCTTCAGGACATTTCAGATCGGAAATCACTAACAAGAGAGGGAAGTAGCAATGCAAGTGATTGGGATGAACATCCACACACAGTTGAAGAAATTAAAACCATGTTGCAGAAGAGAAAAGAAGCAGCTATGAATCGAAACAAGTCCTCGTCTCAAGCTTTTCCTCAACAGGGTACTACAAAGGCATGGGAGAATAAAGGAAGAGTCTCAAGTAATCAAAGAGATCTCGTTAAGACGGTGGAAATTGACACCTCTCAACCTTATTCATATTTCGGATCCAATACTTACAGAAGATCACATCCAAATTATCAATATAACCCTCAGTCGCACCAACATCAAAGGCATTCAATTGCTATCCAAAATGGACCACTTCACCAATCCCCTGTAACCCCATCTCCGGGGAAATCAAGAACGATCCAAGTCCGATCGGCTAGCCCTCGTTGTGGTAGAGAAGATATAAGCTACCAAACCTCTCAAACACCAAGCCTAAGATCCAATAATAATTATCATTGTAAAGGAAATGTGTACTCAAGTAGCAGGGCTGGAACAAGTAATGGTACTAGTGGTGGTGTAACATACCCGAATTACATGGCTACAACAGAATCGGCCAAGGCGCGAAATCGATCAAAGAGTGCACCTAGGCAAAGGGCATTGACACCGGAGAAGGACAGAGTTGGGTCAGCAAAGAGAAGACTTTCGTACCCGGCTCCAGACCCTTGTTATAATGTAGGAATAAGGTATGGAAATAATTATAGGCATAGTTTAAGGAGTCCAAGCTTAAGGAGTGTGAGTAGGTCACATTTTGGGTTGGAGCAATATTCCAACTACTCTTCTTGCTACACTGATAGTCTTGGTAGTGAGATTTCTCCATCTTCAACTAGTGACCTTAAGTGGTTTAAATGA 1233 0.4258 MSTKQTLTKVVESEASTIIEQVPRLKHEAAIVIQTAFRGYLARRALGALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARLLDQQRTRFSHQVSSGASTFSDTNVQYLQDISDRKSLTREGSSNASDWDEHPHTVEEIKTMLQKRKEAAMNRNKSSSQAFPQQGTTKAWENKGRVSSNQRDLVKTVEIDTSQPYSYFGSNTYRRSHPNYQYNPQSHQHQRHSIAIQNGPLHQSPVTPSPGKSRTIQVRSASPRCGREDISYQTSQTPSLRSNNNYHCKGNVYSSSRAGTSNGTSGGVTYPNYMATTESAKARNRSKSAPRQRALTPEKDRVGSAKRRLSYPAPDPCYNVGIRYGNNYRHSLRSPSLRSVSRSHFGLEQYSNYSSCYTDSLGSEISPSSTSDLKWFK* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0808 410 MobiDBLite consensus disorder prediction 155 180 - -
Lan4g0808 410 PANTHER IQ-DOMAIN 5-RELATED 17 407 - -
Lan4g0808 410 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 17 407 - -
Lan4g0808 410 MobiDBLite consensus disorder prediction 311 343 - -
Lan4g0808 410 MobiDBLite consensus disorder prediction 232 279 - -
Lan4g0808 410 Gene3D - 24 85 - -
Lan4g0808 410 MobiDBLite consensus disorder prediction 156 180 - -
Lan4g0808 410 Pfam Protein of unknown function (DUF4005) 255 364 IPR025064 -
Lan4g0808 410 SMART iq_5 48 69 IPR000048 GO:0005515
Lan4g0808 410 SMART iq_5 25 47 IPR000048 GO:0005515
Lan4g0808 410 MobiDBLite consensus disorder prediction 260 279 - -
Lan4g0808 410 MobiDBLite consensus disorder prediction 232 253 - -
Lan4g0808 410 ProSiteProfiles IQ motif profile. 26 54 IPR000048 GO:0005515
Lan4g0808 410 ProSiteProfiles IQ motif profile. 50 77 IPR000048 GO:0005515
Lan4g0808 410 MobiDBLite consensus disorder prediction 325 339 - -
Lan4g0808 410 Pfam IQ calmodulin-binding motif 27 45 IPR000048 GO:0005515
Lan4g0808 410 Pfam IQ calmodulin-binding motif 53 69 IPR000048 GO:0005515
Lan4g0808 410 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0808 Lan-Chr4 10110554 10113152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0808 29 410 IQD Protein Family AT1G01110 51.501 1.29e-117 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0808 - - lang:109345735 795.423