Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0806 ATGGTTCTCAAGACGGAGCTTTGCCGATTTAGTGGTGCGAAGATATACCCAGGGAGAGGCATCAGATTTATTCGTGGTGATTCTCAGGTCTTCCTGTTTGTCAACTCAAAATGCAAGAGATATTTCCACAACCGTTTAAAGCCATCAAAGCTTACCTGGACCGCCATGTATAGGAAGCAACACAAGAAGGATGCTGCTCAAGAAGCTGTGAAGAAGAAGCGTCGTGCTACCAAAAAACCGTACTCTAGGTCTATTGTTGGTGCTACTTTGGAAGTTATCCAGAAAAGAAGAACCGAAAAGCCAGAAGTTCGAGATGCTGCCAGGGAAGCTGCTCTTCGTGAAATTAAGGAGAGGATAAAGAAAACAAAGGACGAGAAGAAGGCTAAGAAGGCAGAAGTTGTGGCTAAATCACAAAAATCAGGCAAAGGAAATGTTTCAAAGGGTGCCGCGTCAAAAGGTCCCAAACTCGGTGGTGGAGGTGGGAAACGCTGA 492 0.4533 MVLKTELCRFSGAKIYPGRGIRFIRGDSQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVVAKSQKSGKGNVSKGAASKGPKLGGGGGKR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0806 163 Gene3D - 69 138 - -
Lan4g0806 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Lan4g0806 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Lan4g0806 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 IPR000988 -
Lan4g0806 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Lan4g0806 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Lan4g0806 163 Coils Coil 112 132 - -
Lan4g0806 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Lan4g0806 163 SMART 4TRASH 8 46 IPR011017 -
Lan4g0806 163 MobiDBLite consensus disorder prediction 119 163 - -
Lan4g0806 163 MobiDBLite consensus disorder prediction 119 136 - -
Lan4g0806 163 PANTHER 60S RIBOSOMAL PROTEIN L24 3 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0806 Lan-Chr4 10102221 10104053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0806 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 2.88e-86 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0806 K02896 - dcr:108225184 238.81