Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0805 ATGGGTCAGTGTTACGGCAAAACCAACCCGAATCGCGAAACCGAAACTGCCACCGGACCTTCCGGTTCCCGGTCACCTTTTCCGGCAGCTAGCGGTGGTAACGGTTACCAGTCGGTGAGGAACACGCCGGCGAGGTCATCGTCATCTCAAGCGAGTCCATGGCCGAGTCCGTACCCTCACGGGGAGGGTGTGTCGCCGTCGCCGGCGAGGGGTACGACGCCGATGAGGTTTTTCCGGCGGATGTTTCCGCCGCCGTCTCCGGCGAAGCATATAAAGGCGTCGTTGGCGAAGAGGCTGGGGAGGAAGGTGGAGAAGGAGGGGATTATACCGGAGGAGGGGCGGGCGGCTTCGGCGGCGGCGGAAGGGGAGGAGGAAGTGCTGGATAAGAGGTTTGGGTATGGGAAGAATTTTGGAGGAAAATATGAATTGGGGAAAGAAGTTGGGAGAGGGCATTTTGGTCATACTTGCTATGCTAAGGGTAAGAAAGGTGAACTCAAAGATCAACCTGTTGCTGTTAAAATCATTTCTAAGGCCAAGATGACCACAGCAATAGCAATTGAAGATGTTCGTAGAGAGGTGAAGATATTAAAATCTCTATCTGGCCATACACATCTCGTCAGATTTCATGATGCTTGTGAGGATGACAATAATGTGTACATAGTTATGGAATTGTGTGATGGCGGGGAGCTACTTGACCGGATTTTGTCAAGGGGAGGAAGGTATACAGAGGAGGATGCCAAGGTTATAGTTTTTCAGATTCTCAGTGTGGTTGCCTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACTTAAAGCCCGAGAATTTCCTCTTCACTTCAAGAAGTGAAGACGCTGATATGAAGCTTATTGATTTTGGTCTATCTGACTTCATTAGACCAGATGAACGATTGAATGACATTGTTGGAAGTGCATATTATGTTGCACCTGAGGTCCTTCATAGGTCATATAGTGTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTACATCTTACTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTTCTGTGCTCAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCGTCTCTATCTCCAGAGGCTAAGGACTTCGTAAAAAGACTCCTAAACAAGGACTACAGGAAAAGAATGTCTGCTGCCCAAGCTCTAGCTCATCCTTGGTTGAGGGACGACAACCACCCTATCCCTTTGGATATAATAATTTATAAATTAGTGAAGTCTTATCTTCATGCAACGCCATTCAAACGCGCAGCAATGAAGGCCCTTTCAAAAGCATTGACAGAGAATGAGTTGGTGTATCTTGAAGCACAATTCAGATTATTGGAACCAAGTAGAGATGGATATGTCTCCCTTGAAAATTTCAAAATGGCTCTTGCACAAAATGCAACTGATGCTATGAGGGAGTCTAGGGTTCTTGACATCGTACACATGATGGAACCACTTGCCTATAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCAACTAGCACATATCAATTGGAGGCACTTGATAGATGGGAAGATATTGCGAACACTGCATTTGAACATTTTGAGCGAGAAGGCAACCGTGTCATATCGATCGAAGAATTAGCAAGAGAGTTGAATCTTGGTCCTTCAGCTTATTCAATTCTCAAAGATTGGATCCGAAATGATGGAAAGCTTAATTTACTTGGATATACAAAATTTTTGCATGGTGTTACTCTCAGAAGTTCAAACTCAAGACACCGTTAG 1779 0.4547 MGQCYGKTNPNRETETATGPSGSRSPFPAASGGNGYQSVRNTPARSSSSQASPWPSPYPHGEGVSPSPARGTTPMRFFRRMFPPPSPAKHIKASLAKRLGRKVEKEGIIPEEGRAASAAAEGEEEVLDKRFGYGKNFGGKYELGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKAKMTTAIAIEDVRREVKILKSLSGHTHLVRFHDACEDDNNVYIVMELCDGGELLDRILSRGGRYTEEDAKVIVFQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFDDLPWPSLSPEAKDFVKRLLNKDYRKRMSAAQALAHPWLRDDNHPIPLDIIIYKLVKSYLHATPFKRAAMKALSKALTENELVYLEAQFRLLEPSRDGYVSLENFKMALAQNATDAMRESRVLDIVHMMEPLAYRKMDFEEFCAAATSTYQLEALDRWEDIANTAFEHFEREGNRVISIEELARELNLGPSAYSILKDWIRNDGKLNLLGYTKFLHGVTLRSSNSRHR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0805 592 ProSitePatterns Protein kinases ATP-binding region signature. 147 173 IPR017441 GO:0005524
Lan4g0805 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Lan4g0805 592 SMART serkin_6 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0805 592 MobiDBLite consensus disorder prediction 1 90 - -
Lan4g0805 592 Gene3D - 410 582 - -
Lan4g0805 592 PANTHER CDPK-RELATED KINASE 3 51 585 - -
Lan4g0805 592 Gene3D Phosphorylase Kinase; domain 1 134 230 - -
Lan4g0805 592 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 585 - -
Lan4g0805 592 MobiDBLite consensus disorder prediction 1 55 - -
Lan4g0805 592 ProSiteProfiles Protein kinase domain profile. 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0805 592 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Lan4g0805 592 SUPERFAMILY Protein kinase-like (PK-like) 131 426 IPR011009 -
Lan4g0805 592 Pfam Protein kinase domain 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0805 592 CDD STKc_CAMK 140 402 - -
Lan4g0805 592 Gene3D Transferase(Phosphotransferase) domain 1 231 409 - -
Lan4g0805 592 SUPERFAMILY EF-hand 429 580 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0805 Lan-Chr4 10092513 10100102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0805 1 586 EF-hand Containing Proteins AT3G50530 58.399 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan4g0805 Pkinase 5.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0805 - - gmx:100796256 937.947