Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0781 ATGTCTGAAGAGGCTGGATCCATGTTGGTAGTTTATGATGATACAAGCAGTACAGAGGAATCTACTCATCAAACTAGCCTCTCCTTGGAAACAACTAATGATGCTATTCCTTACATCGGTCAAAGGTTTCCCACTCATGATGCTGCTTATGAATTCTATACTGAATTTGCCAAGAGTTGTGGCTTCTCAATTCGACGTCACCGCACAGAGGGAAAAGATGGTGTTGGTAAAGGACTTACTAGACGCTACTTTGTTTGTCATCGTGCTGGAAACACTCCTGTCAAAACTTCAACCGAAAGTAAACCCCAAAGGAATAGAAAATCTTCTCGATGCGGATGCCAGGCTTATATGCGGATAAGCAAGACAACAGAATCTGGAGCCCCTGAATGGCGTGTGACTGGTTTTGCAAACCACCATAATCATGAACTTCTAGAACCAAACCAAGTTCGATTTCTTCCTGCATACAGAACTATTTCCGATGCCGACAAAAACCGAATCCTTATATTTGCCAAAACAGGGATCTCTGTTCATCAAATGATAAGGCTCATGGAGCTTGAGAAGTGTGTGGAACCTGGATATTTGCCCTTTACTGAAAAGGATGTAAGGAATTTACTACAGTCATTTAGAAAAATAGATCCAGAAGAAGAAAGCTTAGATTTATTAAGAATGTGCAGAAACATTAAGGACAAAGATCCTAATTTTAAGTTTGAGTATACGCTTGATATAAACAACCGTTTGGAGAACATTGCCTGGTCATATGCCTCGTCAATCCAGTTGTATGATATCTTTGGTGATGCAGTGGTGTTTGATACAACACACCGCCTGACTGCATTTGACATGCCACTTGGGATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTGCGAGACGAAACCATGAGGTCATTCTCCTGGGCACTGAAGGTTTTCTTAGGTTTTATGAATGGGAAAGCTCCACAGACTATATTAACTGACCAAAATATATGTCTCAAAGAGGCACTATCCATGGAAATGCCAACAACAAAACACGCTTTCTGCATATGGATGGTAGTGGCAAAGTTTCCATCTTGGTTTAATGCTGTTCTAGGAGAGCGTTACAATGAGTGGAAGGCTGAATTTTATAGGATCTATAATCTTGAGTCAGTTGAGGATTTTGAACTAGGCTGGCGAGAAATGGTTTGTTCTTTTGGGCTGCATTCCAACCGGCACATGGTTACTTTATATAGCTCACGCTCATTTTGGGCGTTGCCATTTTTAAGAAGCCATTTTCTTGCGGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGGTTTCTAAGTGCACAGACTCGACTTGCACATTTTGTTGAACAGGTAGCTGTTGCTGTGGATTTTAAAGATCAAACTGGAGAACAACAAACCATGCAGCAGAATCTCCAAAATGTTTGCCTCAAAACAGGAGCCCCCATGGAATCACACGCTGCCACAATTCTCACTCCTTTTGCCTTTTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCTTCTTTTCCAATTGAAGATGGTTTTCTTGTTAGGCACCACACAAAAGCTGAGGGAGGTAGGAAAGTTTATTGGGCCCCTCAGGAAGGAATTATTAGTTGCAGCTGCCACCAGTTTGACTTCTCTGGAACTCTCTGTAGGCATTCTCTAAGAGTTCTTTCCACAGGAAATTGTTTTCAGATCCCAGATAGGTATCTTCCCATTCGTTGGCGTCGTATCAGTATGCCCTCTTCTAAGCTTCTTCAGAGTGCACCTAATGATCATGCTGAAAGAGTTCAATTATTGCAAAATATGGTTTCATCTCTGATAACAGAATCTGCAAAGTCTAAGGAACGATTAGATATTGCAACGGAGCAAGTTTCCAATCTTTTGTCTCGCATAAGAGAGCAACCGATTTCATTACAAGGTGTCAAAGATGTTTCTTCCATCAATAGGAATGTGTGA 2007 0.4116 MSEEAGSMLVVYDDTSSTEESTHQTSLSLETTNDAIPYIGQRFPTHDAAYEFYTEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTESGAPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDADKNRILIFAKTGISVHQMIRLMELEKCVEPGYLPFTEKDVRNLLQSFRKIDPEEESLDLLRMCRNIKDKDPNFKFEYTLDINNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLRDETMRSFSWALKVFLGFMNGKAPQTILTDQNICLKEALSMEMPTTKHAFCIWMVVAKFPSWFNAVLGERYNEWKAEFYRIYNLESVEDFELGWREMVCSFGLHSNRHMVTLYSSRSFWALPFLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVCLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPIEDGFLVRHHTKAEGGRKVYWAPQEGIISCSCHQFDFSGTLCRHSLRVLSTGNCFQIPDRYLPIRWRRISMPSSKLLQSAPNDHAERVQLLQNMVSSLITESAKSKERLDIATEQVSNLLSRIREQPISLQGVKDVSSINRNV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0781 668 Pfam FAR1 DNA-binding domain 51 144 IPR004330 -
Lan4g0781 668 Pfam MULE transposase domain 267 358 IPR018289 -
Lan4g0781 668 SMART 26again6 553 580 IPR006564 GO:0008270
Lan4g0781 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 662 IPR031052 GO:0006355
Lan4g0781 668 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 10 662 - -
Lan4g0781 668 MobiDBLite consensus disorder prediction 1 27 - -
Lan4g0781 668 MobiDBLite consensus disorder prediction 11 27 - -
Lan4g0781 668 Pfam SWIM zinc finger 549 576 IPR007527 GO:0008270
Lan4g0781 668 ProSiteProfiles Zinc finger SWIM-type profile. 542 578 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0781 Lan-Chr4 9814205 9817568 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan4g0781 MULE 2.1e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0781 - - gmx:100810717 1262.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0781 4 9814205 9817568 Lan19g0865 19 16134660 16138796 LSH