Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0763 ATGCCTAAATCCAAGAGAAATAAACAAGTTACATTATCGAAGACGAAGAAAAAGGGAAGGGATCATAAGGAAGGAATAGTGAACTCAATAAAAGATGCTGCTGAGGAATACAACTCAGTTTACGTATTCTCATTTGAGAATATGAGGAATCAGAAATTGAAGGAGTTTAGGGACCAATTGAAATCGAATAGCAGATTCTTCTTGGGTTCTAACAAAGTCATGCAAGTTGCTCTAGGTCGATCTCCCTCTCATGAGCTTAAACCCAATCTTCATAAGCTTTCTAAGCTACTGCGCGGAGATGCTGGAATGGTTTTTACCAATTTGCCTAAAGAAGAAGTTGAAAGGCTATTTAACGGGTTTGAGGAATATGACTTTGCAAGAACTGGAACTGTTGCCACTGAAAAGGTTGATCTCAAAGAGGGCCCTCTAGAGCAGTTCACACATGAGATGGAACCCTTTCTCCGGAAGCAAGGCATGCCTGTTAGATTAAATAAAGGAGTTGTGGAGCTTGTTTCTGATTACGTTGTTTGTGAGGAGGGGAAGCCTTTGTCACCCGAGGCAGCTCGCATACTGCGTTTGCTGGGAATCAAGATGGCTACATTTCGACTTCACTTGATTTGCAGGTGGAGTTCTGATGATTTTGAACTTTACATTGATGGGCCTGATGATTCAGATGTTGAATGTGCTTAG 690 0.4145 MPKSKRNKQVTLSKTKKKGRDHKEGIVNSIKDAAEEYNSVYVFSFENMRNQKLKEFRDQLKSNSRFFLGSNKVMQVALGRSPSHELKPNLHKLSKLLRGDAGMVFTNLPKEEVERLFNGFEEYDFARTGTVATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDYVVCEEGKPLSPEAARILRLLGIKMATFRLHLICRWSSDDFELYIDGPDDSDVECA* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0763 229 MobiDBLite consensus disorder prediction 1 24 - -
Lan4g0763 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Lan4g0763 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Lan4g0763 229 Gene3D - 30 212 IPR043141 -
Lan4g0763 229 PANTHER RIBOSOME ASSEMBLY FACTOR MRT4 1 227 - -
Lan4g0763 229 MobiDBLite consensus disorder prediction 1 16 - -
Lan4g0763 229 Gene3D - 125 198 IPR043164 -
Lan4g0763 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 227 - -
Lan4g0763 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Lan4g0763 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0763 Lan-Chr4 9738340 9755118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0763 35 217 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 23.497 1.11e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0763 K14815 - gmx:100500064 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0763 4 9738340 9755118 Lan16g0034 16 155295 157417 LSH