LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan4g0757	ATGGCTCTCTTTGTTCTGAGATTTGTATTGACTTCATTCTTAATGTTTTGTTGTGAGAGCCAACTTCTACAAGTGGGGTTCTACTCAAACACTTGTCCTCAAGCTGAGTCAATTGTTCATAATGTTGTTAGAGAATCTGTCATCTCTGACCACAACATGGCTGCTGTTTTGCTCAGGCTTCACTTTCATGATTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATAGACAATGGTCCAAATTCAGAGAAAAATGCATTTGGACATGAAGGGATTAGAGGATTTGATGTAATAGAAAGAGCCAAGGCAGAATTGGAAGCATCTTGCCCTGGAGTAGTTTCTTGTGCAGACATAGTAGCATTAGCAGCAAGAGATGCCATAGTCATGGCAAATGGGCCAATGTACCAAGTTCCAAGTGGGAGAAAAGATGGATTGGTTTCAAATGTTTCACTTGCTCAAGCCATGCCAGATGTTAGTGATTCAATTCAGATACTAAATGCCAAGTTTCTCAACAAGGGCCTCACACAAAAAGACCTTGTCCTTCTTAGTGGTGCTCATACAATTGGAACCACAGCATGCTTCTTCATGACCAAAAGGCTATACAATTTTTTCCCAAGTAGTGGTAGTGGATCAGACCCATCTATCAACACAAGGTTCCTCCAAGAGCTTAAAACAAGGTGCCCTCAGAATGGAGATGTTAATGTCCGAATTGCCATTGATGAAGGTGGTCACAACAAATTTGACAAACACATTTTGGACAACATAAGGCAAGGTTTTGCTGTGCTAGAATCTGATGCTAGGCTTAATGATGACATTGTCACCAAGTTTATTATTGACTCTTACTTTAACAATCCAATATTTGGGCCTTCTTTTGAAGCTGATTTTGTTGAGTCCATTGTCAAGATGGGCCAAATTGGAGTCAAGACAGGTTTCCTTGGAGAGATTAGGCACAAGTGCTCAAAGTTCAATTAA	972	0.4033	MALFVLRFVLTSFLMFCCESQLLQVGFYSNTCPQAESIVHNVVRESVISDHNMAAVLLRLHFHDCFVEGCDGSILIDNGPNSEKNAFGHEGIRGFDVIERAKAELEASCPGVVSCADIVALAARDAIVMANGPMYQVPSGRKDGLVSNVSLAQAMPDVSDSIQILNAKFLNKGLTQKDLVLLSGAHTIGTTACFFMTKRLYNFFPSSGSGSDPSINTRFLQELKTRCPQNGDVNVRIAIDEGGHNKFDKHILDNIRQGFAVLESDARLNDDIVTKFIIDSYFNNPIFGPSFEADFVESIVKMGQIGVKTGFLGEIRHKCSKFN*	324

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan4g0757	323	ProSitePatterns	Peroxidases proximal heme-ligand signature.	178	188	IPR019793	-
Lan4g0757	323	Gene3D	-	26	323	-	-
Lan4g0757	323	PRINTS	Plant peroxidase signature	32	51	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Plant peroxidase signature	56	76	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Plant peroxidase signature	93	106	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Plant peroxidase signature	112	122	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Plant peroxidase signature	131	146	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Plant peroxidase signature	177	189	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Plant peroxidase signature	254	271	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Plant peroxidase signature	297	310	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Haem peroxidase superfamily signature	54	68	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Haem peroxidase superfamily signature	113	130	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Haem peroxidase superfamily signature	131	143	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PRINTS	Haem peroxidase superfamily signature	178	193	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	ProSiteProfiles	Plant heme peroxidase family profile.	22	323	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	PANTHER	PEROXIDASE	15	321	-	-
Lan4g0757	323	CDD	secretory_peroxidase	23	322	IPR033905	GO:0004601\|GO:0042744
Lan4g0757	323	Gene3D	Peroxidase, domain 2	156	302	-	-
Lan4g0757	323	ProSitePatterns	Peroxidases active site signature.	54	65	IPR019794	GO:0004601
Lan4g0757	323	PANTHER	PEROXIDASE 25-RELATED	15	321	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	Pfam	Peroxidase	40	283	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Lan4g0757	323	SUPERFAMILY	Heme-dependent peroxidases	23	323	IPR010255	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan4g0757	Lan-Chr4	9707436	9709863	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan4g0757	1	323	Peroxidase	AT1G77100	55.215	2.36e-114	332

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan4g0757	K00430		-	gmx:547549	498.434

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan4g0757	4	9707436	9709863	Lan19g1054	19	17716109	17720375	LSH