Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0754 ATGGAGAGAGTGGCTTCATCTATTATAGGTTCCTTTCTTGTTTGGGCAATTTTGGTGCTTAAGATTTCTGCCAATGCGGAAGGTGATGCCTTGAACGCATTGAAGAGCAACTTGCTTGATCCTAACGATGTTCTTCAAAGCTGGGATGCTACCCTTGTCAATCCCTGCACTTGGTTTCATGTTACATGCAATAGTGACAATAGTGTGACCCGTGTTGATCTTGGAAATGCAGACCTTTCGGGTCAACTGGTTCCACAACTTGGTCAGATCTCAAATTTACAGTACTTGGAACTCTATAGCAATAATATAACTGGAAAAATCCCAGACGAGATTGGGAATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAAGTTAACTGGTCCCATACCAAATACATTGGGCAAGCTTGGAAAACTGCGTTTCCTTGATCTCTCAAACAACCAGCTTAAAGGGTTAATACCAGTGACTGGTTCATTTTCACTATTTACTCCCATAAGTTATTCAAATAATCCCGGATTGATAGCACCAAAAAATACACCATCTGCTCCACTTTCTCCACCGGCAGCAACGTCTTCAGGTAATAGTGCTACTGGTGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCCCTGTTGTTTGCAGCCCCTGCAATCGCACTTGCATATTGGCGCAGAAGGAAACCTCAGGATCACTTCTTTGACGTTCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTCAAAAGGTTTTCTCTGCGTGAGCTGCAAGTTGCTACCGATAACTTCACTAACAAAAACGTTCTTGGTAGAGGTGGATTTGGAAAGGTTTATAAAGGACGCTTAGCTGATGGCTCTCTTGTAGCAGTAAAAAGACTTAAGGAGGAACGTACACAGGGTGGGGAGCTGCAATTTCAAACAGAGGTTGAAATGATCAGCATGGCGGTGCATCGTAATTTGCTTCGCCTCAATGGTTTTTGCATGACACCTACTGAACGGTTGCTTGTGTATCCTTTCATGGCTAATGGAAGTGTAGCATCATGTTTACGAGAGCGTTTTGATGGTAGACCACCACTCGATTGGCCAATAAGGAAACGTATTGCGCTGGGTTCTGCTAGGGGGCTTGGTTATTTGCATGAACATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCTGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGGGATTTTGGTTTAGCAAGACTTATGGATTACAAGGATACTCATGTTACTACTGCAGTACGTGGTACAATTGGGCATATAGCACCAGAGTACCTCTCAACCGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTCGATCTAGCTCGTCTTGCCAATGATGACGATGTCATGTTGCTGGATTGGGTTAAAGGACTTCTGAAAGACAAGAAGTTGGAAACACTGGTAGATGCAGATTTACAGGGAAATTATGATGATGATGAGGTAGAGCAGTTAATCCAAGTGGCCTTACTATGCACACAAGGCTCCCCCACGGAAAGACCGAAGATGTCTGAGGTTGTCAGAATGCTAGAAGGCGACGGTTTGGCCGAAAAATGGGAACAATGGCAGAAAGAGGAGATGTTCCGACAAGATTTTAACCACCTTCATTACTCTAATGCAAATTGGATAGTAGACTCAACTTCAGATATCCAACCAGATGAACTATCAGGTCCTAGATGA 1764 0.4359 MERVASSIIGSFLVWAILVLKISANAEGDALNALKSNLLDPNDVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNADLSGQLVPQLGQISNLQYLELYSNNITGKIPDEIGNLTNLVSLDLYLNKLTGPIPNTLGKLGKLRFLDLSNNQLKGLIPVTGSFSLFTPISYSNNPGLIAPKNTPSAPLSPPAATSSGNSATGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFTNKNVLGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLNGFCMTPTERLLVYPFMANGSVASCLRERFDGRPPLDWPIRKRIALGSARGLGYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLQGNYDDDEVEQLIQVALLCTQGSPTERPKMSEVVRMLEGDGLAEKWEQWQKEEMFRQDFNHLHYSNANWIVDSTSDIQPDELSGPR* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0754 587 Gene3D Transferase(Phosphotransferase) domain 1 341 558 - -
Lan4g0754 587 Gene3D Phosphorylase Kinase; domain 1 233 340 - -
Lan4g0754 587 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Lan4g0754 587 ProSiteProfiles Leucine-rich repeat profile. 140 161 IPR001611 GO:0005515
Lan4g0754 587 ProSiteProfiles Protein kinase domain profile. 264 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0754 587 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 587 - -
Lan4g0754 587 SMART serkin_6 264 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0754 587 PANTHER BNAA08G11770D PROTEIN 16 587 IPR031048 GO:0004675|GO:0005102|GO:0006468
Lan4g0754 587 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Lan4g0754 587 SUPERFAMILY Protein kinase-like (PK-like) 243 539 IPR011009 -
Lan4g0754 587 SUPERFAMILY L domain-like 27 158 - -
Lan4g0754 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Lan4g0754 587 Pfam Protein tyrosine and serine/threonine kinase 266 538 IPR001245 GO:0004672|GO:0006468
Lan4g0754 587 Pfam Leucine rich repeat 91 151 IPR001611 GO:0005515
Lan4g0754 587 Gene3D Ribonuclease Inhibitor 23 176 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0754 Lan-Chr4 9693883 9698964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0754 23 587 Receptor kinase-like Gene Family AT1G71830 76.040 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan4g0754 PK_Tyr_Ser-Thr 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0754 K13416 - gmx:100800522 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0754 4 9693883 9698964 Lan16g0050 16 269465 278475 LSH