Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0752 ATGATAAGAATGAACATTCTATCCTTAAGCTCAAGCCATAGCATTTCCAACCAACTTCATTTCCATCCACTCTCAAATAACAAACACCAAAAACCTCTTTCTATGCATTTCTCTGTTTCATGCAGAGCCACAACTCATGCTGATGCCAACAACTTCTACAACATGCTCTCTTTGTGTCCCAAAAGTGCAACCATGGATGACATAAAGAGATCTTATAGGTCAATGGCACTAAGGTACCACCCTGATGTGTGTCATGATGTTTCCAAGAAAGAAGAATCAACAAAGATGTTTGTGAAACTCAATGCAGCTTACAACACCTTGTCCAATCCAAGGCTTAGAGCTGAGTATGACTCTGAGTTGTTGTTGGGTTTGAGAAGCCAAACAAGTGTTGGTGATGAATATGAGAGTTGGAGATGTAGGTGGCAACAGCAAGTGATTCAGCTGAAGAGAAGGCCACAAAAAAAGGGATCATGGGGTACTAAAATCAGAGCACAAAATATGAACATTAAATGGTAG 516 0.4012 MIRMNILSLSSSHSISNQLHFHPLSNNKHQKPLSMHFSVSCRATTHADANNFYNMLSLCPKSATMDDIKRSYRSMALRYHPDVCHDVSKKEESTKMFVKLNAAYNTLSNPRLRAEYDSELLLGLRSQTSVGDEYESWRCRWQQQVIQLKRRPQKKGSWGTKIRAQNMNIKW* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0752 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 8 168 - -
Lan4g0752 171 PRINTS DnaJ domain signature 54 72 IPR001623 -
Lan4g0752 171 PRINTS DnaJ domain signature 72 87 IPR001623 -
Lan4g0752 171 PRINTS DnaJ domain signature 92 112 IPR001623 -
Lan4g0752 171 Gene3D DnaJ domain 37 146 IPR036869 -
Lan4g0752 171 ProSiteProfiles dnaJ domain profile. 51 120 IPR001623 -
Lan4g0752 171 CDD DnaJ 51 109 IPR001623 -
Lan4g0752 171 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 8 168 - -
Lan4g0752 171 Pfam DnaJ domain 51 117 IPR001623 -
Lan4g0752 171 SUPERFAMILY Chaperone J-domain 40 120 IPR036869 -
Lan4g0752 171 SMART dnaj_3 50 112 IPR001623 -
Lan4g0752 171 ProSitePatterns Nt-dnaJ domain signature. 97 116 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0752 Lan-Chr4 9690248 9690919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0752 53 118 C2H2 Transcription Factor Family AT1G74250 39.706 8.73e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0752 - - vun:114187063 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0752 4 9690248 9690919 Lan19g1046 19 17673068 17673699 LSH