Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0750 ATGGCAGCTGCAACATCTGGTGCTGTCTTGGGTTCTTCCTTCTTATGTGGAGGAAAGAGGAGTCAAAGCCTGTTAGCTAGTGCTGTAACCAAAGTTGGTGCTTTTGTTAATCCTAAAAGACTTAATGTGGTTGCTGCTGCTACTGCTACTGCACCAAAAAAGTCATGGATTCCTGCTGTTAAAGGTGGTGGAAATTTGATAGACCCTGAATGGCTTGATGGCTCACTACCGGGTGACTATGGTTTTGACCCACTAGGCCTAGGCAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTTATTCATGGAAGATGGGCAATGGCTGCAGTTCTAGGCATCTTTGTTGGCCAGGCATGGAGTGGAGTTCCATGGTTTGAAGCTGGAGCTGACCCCAATGCAATTGCTCCTTTCTCATTTGGTACACTTCTAGGCACTCAGTTGCTTCTAATGGGATGGGTAGAGAGCAAGAGATGGGTGGACTTCTTTAACCCTGATTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAAAACTGCCGAGAACTTCGCCAATGCCACCGGTGATCAAGGCTACCCTGGGGGAAAATTCTTTGACCCTTTAGGCCTTGCTGGTACAATCAAGGATGGTGTTTACATTCCAGATACAGATAAGCTAGAAAGATTGAAATTGGCTGAGATTAAGCATGCTAGGATTGCTATGTTGGCTATGCTTACTTTCTACTTTGAGGCTGGACAAGGGAAAACACCCCTTGGTGTTTTTGGCTTGTAA 774 0.4651 MAAATSGAVLGSSFLCGGKRSQSLLASAVTKVGAFVNPKRLNVVAAATATAPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLTFYFEAGQGKTPLGVFGL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0750 257 Pfam Chlorophyll A-B binding protein 69 245 IPR022796 -
Lan4g0750 257 SUPERFAMILY Chlorophyll a-b binding protein 64 256 - -
Lan4g0750 257 Gene3D Chlorophyll a/b binding protein domain 69 255 - -
Lan4g0750 257 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 257 IPR001344 GO:0009765|GO:0016020
Lan4g0750 257 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0750 Lan-Chr4 9681548 9682997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0750 1 257 Chloroplast and Mitochondria Gene Families AT1G15820 81.538 6.70e-150 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0750 K08917 - gmx:100527463 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0750 4 9681548 9682997 Lan19g1044 19 17660443 17662189 LSH
Lan12g0237 12 5032999 5034939 Lan4g0750 4 9681548 9682997 PCT
Lan4g0750 4 9681548 9682997 Lan12g0237 12 5032999 5034939 PCT