Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0747 ATGGATACTCTCTGTTGCTTCACCTCTCTCACCCAGGTGGTTGGAGGGCGTTCTTCTTCTAGCTCTGGCAAGGGCAAGGGCCATCAGAGCACAGTCAAGTATGGCTTTAGCCTTGTTAAAGGGAAAGCAAACCATCCCATGGAGGACTATCATGTGGCAAAGATTTTCCAGATCAATGGCCAAGAGCTAGGACTTTTTGCTATATATGATGGACACTTAGGAGACACTGTACCGGCTTATTTGCAAAAGCATCTCTTTTCTAATATCTTGAAGGAAGATGACTTCTGGACTGATCCTAGCAGTTCTATCATTAAAGCTTATGAAACAACAGACCAGGCGATTCTTTCGCACAATCCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCAATTATTATAAATAATCAGAAATTATTGGTAGCTAATGTTGGAGATTCACGAGCGGTCCTGTCAAAAGGAGGGGTGGCCATACAGATGAGTATTGATCATGAGCCAAATACTGAAAGGGGCATCATTGAGAACAAAGGCGGTTTCGTTTCAAACTTGCCAGGAGATGTTGCAAGGGTGAATGGTCAGCTAGCAGTTTCTCGGGCATTTGGAGACAAAAACCTCAAATCACACTTGCGATCTGATCCTGACGTGCAACAAGATGATATTGACTCAGATACTGAGCTTTTGATACCTGCTAGTGATGGTGAATGGAAGGTAATGGCAAACCAAGAAGCAGTTGATATTGCAAGAAGGATAAGAGATCCACAAAAAGCAGCTAAACAAGTAGCTGCTGAGGCATTGAACAGAGAGAGTAAGGATGATATATCCTGCATTGTAGTTCGTTTCAAGCCATGA 849 0.4358 MDTLCCFTSLTQVVGGRSSSSSGKGKGHQSTVKYGFSLVKGKANHPMEDYHVAKIFQINGQELGLFAIYDGHLGDTVPAYLQKHLFSNILKEDDFWTDPSSSIIKAYETTDQAILSHNPDLGRGGSTAVTAIIINNQKLLVANVGDSRAVLSKGGVAIQMSIDHEPNTERGIIENKGGFVSNLPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQQDDIDSDTELLIPASDGEWKVMANQEAVDIARRIRDPQKAAKQVAAEALNRESKDDISCIVVRFKP* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0747 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Lan4g0747 282 Gene3D - 16 282 IPR036457 -
Lan4g0747 282 SMART PP2C_4 29 278 IPR001932 -
Lan4g0747 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Lan4g0747 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Lan4g0747 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Lan4g0747 282 CDD PP2Cc 32 280 IPR001932 -
Lan4g0747 282 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0747 Lan-Chr4 9659214 9663697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0747 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 3.00e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0747 K17506 - gmx:100787659 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0747 4 9659214 9663697 Lan19g1038 19 17613767 17618079 LSH
Lan17g0637 17 5506279 5511745 Lan4g0747 4 9659214 9663697 PCT
Lan4g0747 4 9659214 9663697 Lan17g0637 17 5506279 5511745 PCT