Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0734 ATGGACGGTGGCGGAAAAGCGGAGGCGGAACGGTGGCTATACACCGCGAACAAGCTTTTAACGGCGCGTGACTTGCACGGAGCTCGGTCATTTGCGATCCGTGCCAGAGAATCTGACCCGAGATTCGAGGCGACGGAGCTGTTACTTGCGGTGATTGACACGCTCCTCGCCGGTGAGGCACGAATCAGCGAGCATTTAGTTGATTGGTATTCAATTCTTCAGGTGCTACGATACACGCAGAGTATTGAGTATATAGCAGCGCAGTATCGCCGACTCGCTATCATCCTTGACCCTCAACGTAACCCTTTCGCTTTCGCTACTCATGCGTTTCAGCTCGTGCATGATGCTTGGTCTGTTCTTTCTAACCCTAACAAGAAAATTGTTTATGATAATGACCTTAGATTGTTGACTGAACCACCGCAGCAACCACCGCCTCCTCCTCCCGCTCCAGCACCGGCTCCTCCGTTGGTTACCGGTTTTCAGTTTTCGCCTCCGAGGCAAATCCAAATCCAAATCCAGAACCAAAATCAGCATCACCACAATCAGAATCAACACTACCAGAATCAGCACCAGAGTCAACAGCAGCAACAACAGCAGCAGGTTCAAATTAGGAAAAGCCCTAAGTCTTTAAGTCAGGCTAGGGTGGTGGTTGTTGAGGAAGAGACGCATAATCAGAATCGGAGTCTGGACAATGTGACTGAACCTGAACCGGTTTGGGTGGACCGGACTGATGACTCAACCCGGACTCAGTCTGTGACTGAGAATGTTATAGAGAGTTTTTGGACTGCATGTCCTTATTGTTATGTTATTTATGAGTATCCTAAGGTGTATGAGGACTGTACCCTCCGGTGTCAGAGTTGCCGGAAGGGGTTTACTGCGGTGGTGGTTAGGTCACCACTGAATTTGGGTGAGAATGATGATAGTTATTGCAGTTGGGGGTTTATGCCATTAGGTTTTTCTGGTAATTTGAAAGAGTTAAGTGGGGGTTCTTCTGATTGGAACCCGTTTTCGCCTTTGTTTCCTTGTCCTTTAAAGGGCGGGTCTACCAGGAAGGGCCGGAAGGGGCCTGTGGCCTACTATGACCAGGAAGCGTGTGTGGCGTTTGTGGAGAAAGAGCTTTCGGATAGTAGTGATGATTCCGATGATGGGGACTGGCGAAATACTTATACTAAGAGGTTGAGGAAGAGGGCGAGGGGGATTGGAAGAAGGTCAGGCTTTGCTTCTGCTAGTGGTGTTGTTAGAAGGTCAAAGACTGGTAGACCGAGGAAGGGGGTTCAGAATAATGTAGGGGATGTCAATGTGGCCAATGGTGAGGCTGTTAATGGTCATGGTGGTGGGCCTGCACCTGCAGCGGCAGTTGCTGCAAGGCCGGAATCAAGCAAGAAGGCTGCAGTGGTTGGTGCTAGGAGGAGGGGTGCAGCAAACTTGGGGAAGTTAGACTTGAATGTAGAGTTTAGCAATGAGGTGGATGAGCATGCACCTGGAGCGAGTGAAGGGAATGGCATGAATGGCAATGGGAATGCACCTGGGACTGGAAATGCTGAGGATAATATCGAAGGCATTGGGTTTTTTGAGGGGCTTGATGAGTTCCTCAGTAGCTTACCCATTCTCAATGTTGTTGCAGATGATAAGGTTAAGGGTAATTAG 1647 0.4942 MDGGGKAEAERWLYTANKLLTARDLHGARSFAIRARESDPRFEATELLLAVIDTLLAGEARISEHLVDWYSILQVLRYTQSIEYIAAQYRRLAIILDPQRNPFAFATHAFQLVHDAWSVLSNPNKKIVYDNDLRLLTEPPQQPPPPPPAPAPAPPLVTGFQFSPPRQIQIQIQNQNQHHHNQNQHYQNQHQSQQQQQQQQVQIRKSPKSLSQARVVVVEEETHNQNRSLDNVTEPEPVWVDRTDDSTRTQSVTENVIESFWTACPYCYVIYEYPKVYEDCTLRCQSCRKGFTAVVVRSPLNLGENDDSYCSWGFMPLGFSGNLKELSGGSSDWNPFSPLFPCPLKGGSTRKGRKGPVAYYDQEACVAFVEKELSDSSDDSDDGDWRNTYTKRLRKRARGIGRRSGFASASGVVRRSKTGRPRKGVQNNVGDVNVANGEAVNGHGGGPAPAAAVAARPESSKKAAVVGARRRGAANLGKLDLNVEFSNEVDEHAPGASEGNGMNGNGNAPGTGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGN* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0734 548 SMART dnaj_3 67 125 IPR001623 -
Lan4g0734 548 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 154 - -
Lan4g0734 548 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 196 547 - -
Lan4g0734 548 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 196 547 - -
Lan4g0734 548 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 154 - -
Lan4g0734 548 MobiDBLite consensus disorder prediction 136 160 - -
Lan4g0734 548 CDD DnaJ 68 122 IPR001623 -
Lan4g0734 548 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Lan4g0734 548 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Lan4g0734 548 MobiDBLite consensus disorder prediction 138 159 - -
Lan4g0734 548 MobiDBLite consensus disorder prediction 491 514 - -
Lan4g0734 548 Pfam DnaJ domain 68 130 IPR001623 -
Lan4g0734 548 Gene3D DnaJ domain 65 134 IPR036869 -
Lan4g0734 548 MobiDBLite consensus disorder prediction 400 456 - -
Lan4g0734 548 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Lan4g0734 548 MobiDBLite consensus disorder prediction 174 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0734 Lan-Chr4 9600782 9602594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0734 8 548 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 37.658 2.03e-94 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0734 - - lang:109345659 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0734 4 9600782 9602594 Lan16g0067 16 386485 388441 LSH
Lan17g0645 17 5591649 5593879 Lan4g0734 4 9600782 9602594 PCT
Lan18g0638 18 11466189 11467917 Lan4g0734 4 9600782 9602594 PCT
Lan6g0660 6 5881979 5883749 Lan4g0734 4 9600782 9602594 PCT
Lan4g0734 4 9600782 9602594 Lan17g0645 17 5591649 5593879 PCT
Lan4g0734 4 9600782 9602594 Lan18g0638 18 11466189 11467917 PCT
Lan4g0734 4 9600782 9602594 Lan6g0660 6 5881979 5883749 PCT