Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0730 ATGAGTTCTGAAGTTGTTACTGAAGAATGCATAGGATGGGCTGCAAGAGATTCAACAGGAGTTTTATCACCTTACAAATTCAGTCGCAGGGCGGTCGGCGACGACGATGTTTATATTAAGATTACACATTGTGGTGTTTGTTATGCTGATGTAATTTGGACAAGGAATTATCACCATGACTCAAAGTATCCTGTTGTGCCAGGACATGAGATTGCTGGGATTGTGACGAAGGTTGGTTCGAACGTCGATCGTTTCGATGTTGGTGACCATGTTGGAGTGGGGACTTACGTGAACTCATGCAGGGATTGTGAGTATTGTAATGACAGAGCAGAAGTTAATTGTGTCAAGGGTTCTGTTTTTACTTTCAATGGTGTTGATGTTGATGGTACAATTACAAAAGGAGGATACTCCAGTTACATAGTAGTTCATGAAAGATATTGCTTTGTGATACCTAAAAATTATCCATTGGCCTCAGCAGCTCCTTTGCTTTGCGCTGGAATTACGGTTTATTCTCCCATGATACGGCACAAGATGAACCAACCTGGTAAATCTCTAGGAGTGATTGGTCTCGGTGGCCTCGGTCACATGGCAGTGAAATTTGGAAAGGCATTTGGATTGAATGTAACAATTTTGAGTTCAAGCATATCCAAGAAGGAAGAGGCCCTGAGTCTGCTTGGTGCAGACAAATTTGTACTATCATCTGATCAAGAGCAGATGAAAGCATCAGCTAAGTCATTGGACTTCATAATAGACACAGCATCTGGTGATCACCCTTTTGATCCTTACATGTCATTGTTGAAGACATATGGTGTTTTTGTCCTTGTCGGTTTCCCAAGTGTAATCAAATTCAGCCCCGCAAACCTTAATATAGGGATGAAAACCTTTTCTGGAAGTGTTACTGGTGGTACAAAAGATATACAAGAGATGATTGACTTTTGTGCTGCAAAAGAGATTTTCCCAAATATAGAAGTGATTCCAATTGAGTATGCCAATGAAGCTATTGAGAGGGTGGTAAATAAGGATGTGAAATATAGGTTTGTGATAGATATTGAAAACTCCCTCAGAACATAA 1071 0.4043 MSSEVVTEECIGWAARDSTGVLSPYKFSRRAVGDDDVYIKITHCGVCYADVIWTRNYHHDSKYPVVPGHEIAGIVTKVGSNVDRFDVGDHVGVGTYVNSCRDCEYCNDRAEVNCVKGSVFTFNGVDVDGTITKGGYSSYIVVHERYCFVIPKNYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTILSSSISKKEEALSLLGADKFVLSSDQEQMKASAKSLDFIIDTASGDHPFDPYMSLLKTYGVFVLVGFPSVIKFSPANLNIGMKTFSGSVTGGTKDIQEMIDFCAAKEIFPNIEVIPIEYANEAIERVVNKDVKYRFVIDIENSLRT* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0730 356 PANTHER - 2 354 - -
Lan4g0730 356 PANTHER ALDEHYDE REDUCTASE 2 354 - -
Lan4g0730 356 Gene3D - 165 320 - -
Lan4g0730 356 CDD CAD1 12 349 - -
Lan4g0730 356 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Lan4g0730 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Lan4g0730 356 Gene3D - 13 350 - -
Lan4g0730 356 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Lan4g0730 356 SUPERFAMILY GroES-like 17 183 IPR011032 -
Lan4g0730 356 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Lan4g0730 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0730 Lan-Chr4 9577742 9580051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0730 2 355 Monolignol Biosynthesis Gene Families AT1G72680 75.989 0.0 550
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0730 4 9577742 9580051 Lan16g0074 16 438800 441901 LSH