Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0715 ATGATAACAAGAAACATGCATACGAGGTTGTCAGCAAAAATGGTACACACAAGTTTAGTATTTTTTTGGGTTGTACTTTTGTGCTTATGTTTAGATTTTGGTGCTGCCATAGACACTATCACTTCATCTGAACTTGTCAAAGACCCTCAAACAATAAGCTCCAAAAATGGCTTGTTCACTTTAGGATTTTTCAGTCCTAAAAATTCTACAAACCGCTATGTAGGAATCTGGTATCTCTCTGAATCCAATATCTTATGGGTAGCTAACAGAAACCAGCCACTAAAATTCAATTCTTCAGGGACTGTTACAATTTCCAGAGATGGGAATCTTGTGGTTTTGAACAGAGAGAACAAGACTATTTGGTCATCAAATGCGACGTATATCGCAAGCAATTCAACTGCACAACTTCAAGACACTGGAAATCTAGTGTTGCAAGATAGTAACACAGGAGAGGTTATATGGGAGAGTTTCAAACATCCTACTAATGTTTATATACCAAATATGAAACTTAGTAGAAACAGAATAACAGGTGAGGAAGTATCCTTTACATCATGGAAAAACTCTTCTGATCCTTCTGTTGGGTACTTTTCTTGTAGTCTTGAACGTCTCAGTGCTCCAGAGTTGTTTCTCTGGGTTAATGGAACTCTGCCATATTACCGATCCGGTCCATGGAATGGTGAGATTTTTATTGGTTTTCGGCCTTTGACAACTGGGTATCTAAAGGGATGTAATGTGAGTGATGAAGATGATGGAACTGTTTATTTTTCTTGTGATTCCACTGATCAATATGATTTTAGAACAGTGGCCTTGAGTCCAGAAGGACTATTCGAAACTGCATCATGGAAAAACAAGAAAAAGATATCCAGTGATGTGTTCCATGGAACTAATTGCAATCAATATGGTGTATGTGGTGCATTTGGTAGCTGTGATTGGCAAACATCACCAGTATGTAGCTGTTTGAGTGGCTATCAGGCCAAAAATGTAGAGGAGTGGAATAGAAAGAATTGGACTAGTGGGTGTGTGAGGAAAGTGCCACTACAATGTGGAAGTGAAGTTAGAAAAGATGGGTTTTTGAAACTTGAGAAAATGAAAGTACCAGATTATTTGCAAAAGTCAGCTTCTTTGGAAAATGAATGCAGTGCACAGTGCTTACAGAATTGTTCTTGTGTGGCATATGCATATGACACTGGCATTGGATGCATGTCTTGGTTTGGGGACTTGATAGACACACAAAAATTCTCAGATGGAGGACTTGATCTTTACATTCGCATGCCACCTTCAGAACTTGATAAACATTCAGGTAAACGAAGAGTAATCATTGCAGCTGCAGTGAGTACTATAGGAGTTACTACATTAGCTATTTGTGTTTATCTCTTATGGAAATGGAGTGCTAAACCTACAGCAGCTAGAAAAAGGAAAAGGGATGTAATATTTTGGTTCAATAGAGGTGAATCAACAGCGGTAGATAGAACTGGCAAAAAAATTGGAGAACAGTCCCAAGTAGAACTCCACGAGCAATTGCTATTTGATACAGAAACACTTGCACTTGCAACTAATAACTTTGACTCGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTGTACAAGGGAAAGCTGAAAGATGGCAGGGAAATAGCCGTTAAAAGACTTTCTAAAGCATCTGGACAAGGACTAGAAGAATTCATGAACGAGGTAGTGGTGATTTCTAAGCTTCAACATCGCAACCTAGTAAGACTTCTCGGCTGCTGTAGAGAAGGAGAGGAAAAAATGTTGATCTACGAGTACATGCTGAATAAAAGTTTGGACACATTTATCTTTGGTCCATCCGAGCATAAACTCCTGGATTGGGGAAAACGCTTCAGCATAATAGAAGGAATAGCTCGAGGGTTGCTTTATCTTCATAGAGATTCTAGGTTGAGAATCATTCATAGAGATTTGAAAGCAAGTAATATCTTGCTGGATGAGGAGTTGAATCCAAAAATATCAGACTTTGGATTGGCTAAAATATTTGGAGGGCGTGGAGATGAGGCTAGTACTTCTAGGGTTGTTGGAACATATGGATATATGGCACCTGAATATGCAATGGAAGGAATAGTTTCAGAGAAATCAGACGTCTTTAGTTTTGGAGTTTTGGTACTAGAGATTGTCAGCGGAAGGAAAAACACTAGCTTCTATAACAACGAGCAGTTTAGAAGTCTAGTAAGATTTGTTTGGAAACTATGGAATGAAGACAATATTATATCTGCAATAGATCAAAGCATATGTGACCCTATGCATGAGAAAGATATTGTGAGGTGTGTACACATAGGACTTTTGTGTGTGCAAGAAGGTGCAAGGCACAGGCCTAATATGGCCACTGTGATTTCTATGCTTAACAGTGAAATTGTGAATCTTCCTCCACCAAAGCAGCCCGCATTCATCGAGAAGCCGGATATTTGTAAATCATTGTCTTCCGAAGAACGTCACGCATCACATTCAAACAACATTGTTAGTATTACAGATATCAAAGGCAGATGA 2520 0.3901 MITRNMHTRLSAKMVHTSLVFFWVVLLCLCLDFGAAIDTITSSELVKDPQTISSKNGLFTLGFFSPKNSTNRYVGIWYLSESNILWVANRNQPLKFNSSGTVTISRDGNLVVLNRENKTIWSSNATYIASNSTAQLQDTGNLVLQDSNTGEVIWESFKHPTNVYIPNMKLSRNRITGEEVSFTSWKNSSDPSVGYFSCSLERLSAPELFLWVNGTLPYYRSGPWNGEIFIGFRPLTTGYLKGCNVSDEDDGTVYFSCDSTDQYDFRTVALSPEGLFETASWKNKKKISSDVFHGTNCNQYGVCGAFGSCDWQTSPVCSCLSGYQAKNVEEWNRKNWTSGCVRKVPLQCGSEVRKDGFLKLEKMKVPDYLQKSASLENECSAQCLQNCSCVAYAYDTGIGCMSWFGDLIDTQKFSDGGLDLYIRMPPSELDKHSGKRRVIIAAAVSTIGVTTLAICVYLLWKWSAKPTAARKRKRDVIFWFNRGESTAVDRTGKKIGEQSQVELHEQLLFDTETLALATNNFDSSNKLGQGGFGPVYKGKLKDGREIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCREGEEKMLIYEYMLNKSLDTFIFGPSEHKLLDWGKRFSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGLAKIFGGRGDEASTSRVVGTYGYMAPEYAMEGIVSEKSDVFSFGVLVLEIVSGRKNTSFYNNEQFRSLVRFVWKLWNEDNIISAIDQSICDPMHEKDIVRCVHIGLLCVQEGARHRPNMATVISMLNSEIVNLPPPKQPAFIEKPDICKSLSSEERHASHSNNIVSITDIKGR* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0715 839 Pfam D-mannose binding lectin 84 186 IPR001480 -
Lan4g0715 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 837 - -
Lan4g0715 839 SMART serkin_6 521 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0715 839 Pfam Protein tyrosine and serine/threonine kinase 524 790 IPR001245 GO:0004672|GO:0006468
Lan4g0715 839 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 31 837 - -
Lan4g0715 839 CDD B_lectin 43 160 IPR001480 -
Lan4g0715 839 SUPERFAMILY Protein kinase-like (PK-like) 507 820 IPR011009 -
Lan4g0715 839 Gene3D - 34 158 IPR036426 -
Lan4g0715 839 Pfam PAN-like domain 351 410 IPR003609 -
Lan4g0715 839 SMART blect_4 43 160 IPR001480 -
Lan4g0715 839 ProSiteProfiles PAN/Apple domain profile. 348 425 IPR003609 -
Lan4g0715 839 ProSiteProfiles Protein kinase domain profile. 521 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0715 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lan4g0715 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 191 IPR036426 -
Lan4g0715 839 CDD STKc_IRAK 527 793 - -
Lan4g0715 839 PIRSF SRK 9 839 IPR024171 GO:0004674
Lan4g0715 839 ProSiteProfiles Bulb-type lectin domain profile. 37 157 IPR001480 -
Lan4g0715 839 Gene3D Phosphorylase Kinase; domain 1 483 596 - -
Lan4g0715 839 SMART ntp_6 352 424 IPR003609 -
Lan4g0715 839 Pfam S-locus glycoprotein domain 219 326 IPR000858 GO:0048544
Lan4g0715 839 CDD PAN_AP_plant 344 425 - -
Lan4g0715 839 Gene3D Transferase(Phosphotransferase) domain 1 597 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0715 Lan-Chr4 9501964 9505962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0715 431 839 Receptor kinase-like Gene Family AT4G21410 51.202 4.04e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan4g0715 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0715 - - gmx:100800296 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0715 4 9501964 9505962 Lan19g0991 19 17266611 17270456 LSH
Lan4g0715 4 9501964 9505962 Lan6g0700 6 6178275 6182432 PCT