Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0681 ATGGTTGAATCATTCGTCATCGGAACTGTTCCTTTCAACGCCGATGGCTGGGGCCCACCTGACGCCGCCGTCGACGGTTCCAACACCACCAACCTCCCTCACAACGTCCCCTTTGCTCCCTTCTCCCGCTCCGACAAGCTAGGCCGTATCGCCGATTGGACCCGAAACTTCAACAACCCCACCCGATCCAAAAACCCTTCCGACGCCGTTTTCGACTTCACTCACGACGACTCCTTCCCTGCTTCCGCCGAAGACGACGCCACATTCCGCCTCGTTGACGGGAAACCACCACCGCGCCCTAAATTCGGTCCTAAATGGCGTTTCCAGCAACAAAGACAACTCCCTCAACGCAAGGACGAGGAAGTTGAAGCCAAAAGGCGCGAAGCTGAGAAAGAAAGAGCTCGTCGCGATCGTCTCTACCATCAAAATCGCTCAAACCCTAACGGTCCACGTCGTGAAGCTGCGGTTTACAAATCTTCAGTCGATATTCAACCGGAATGGAATATGCGCGATCAGATTCCTTTCTCTTCGTTCACTAAGCTCTCTTTCACTGTCCCCGAACCCGAAGACCTTCAATTCTGCGGTAGCCTCGAGTATTATGACCGAACCTATGATCGCACTACGCCGAAAAGCGATCGCAGATTGGAGCGTTTCAAGAACAGAACCTTCTTCAAGGTTACCACTACCGACGATCCTGTTATTCGCAGGCTCGCCAATGAGGATAAGGCGACTGTTTTCGCCACTGATAGTATTCTGTCCACGCTTATGTGCGCGCCAAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGTGTTGGGAATAAGTTGTTTTTTGATAAGCGCGATGGTTCACAATTGGATTTGCTTTCGGTTCATGAGACATCTCAGGAGCCTTTGCCTGAGGCCAAGGATGATATTAACTCTGCACATTCGCTGAGTGTTGAGGCTGCTTATATAAACCAGAATTTCTCGCAGCAGGTTTTGGTAAGGGATGGGAATAAAGTGAATTTTGATGAGCCTAACCCTTTTGCTAATGAGGGTGAAGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGTTGGATAATGAGATGTATCTTGTTGCTAGGTGTGAGGTGCAGAGTGTGCTTGATGTGAATAAGCAGAGGTCTTACCTTACTTTGAATGCTTTGAATGAGTTTGATCCCAAGTATTCCGGTTTGGATTGGAGGCAAAAGTTGGAGACTCAAAGGGGTGCTGTGTTGGCTACTGAGCTGAAGAACAATGCGAATAAGTTGGCTAAATGGACTGCTCAGGCACTGTTGGCTAGCGCCGATATGATGAAGTTGGGATATGTGTCTCGAATTCATCCTCGTGATCATTTTAATCATGTGGTTTTGGCTGTCGTTGGATATAAGCCAAAGGACTTTGCAGCACAGATTAATTTGAACCCAAATAATATGTGGGGAATTGTGAAGTCAATTGTGGACATGTGCATGAAGCTTGATGAGGGGAAATATGTTCTTGTGAAGGATCCATCTAAGCCACAGGTTAGGATTTATCAGGTTCCAGCAGATGCATTTGAGAATGACTATGTGGAGGAGCCACTTCCGGAAGAGGAACAAGCTCAACCTCCAGCAGAGGGCGTTGATGGTGAAGAGGCAACTGCTACCACAATTGATGTGAATGATATCAAGATAGATAACCAAGCTTGA 1698 0.4782 MVESFVIGTVPFNADGWGPPDAAVDGSNTTNLPHNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPSDAVFDFTHDDSFPASAEDDATFRLVDGKPPPRPKFGPKWRFQQQRQLPQRKDEEVEAKRREAEKERARRDRLYHQNRSNPNGPRREAAVYKSSVDIQPEWNMRDQIPFSSFTKLSFTVPEPEDLQFCGSLEYYDRTYDRTTPKSDRRLERFKNRTFFKVTTTDDPVIRRLANEDKATVFATDSILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLVRDGNKVNFDEPNPFANEGEEVASVAYRYRRWKLDNEMYLVARCEVQSVLDVNKQRSYLTLNALNEFDPKYSGLDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVVLAVVGYKPKDFAAQINLNPNNMWGIVKSIVDMCMKLDEGKYVLVKDPSKPQVRIYQVPADAFENDYVEEPLPEEEQAQPPAEGVDGEEATATTIDVNDIKIDNQA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0681 565 MobiDBLite consensus disorder prediction 528 565 - -
Lan4g0681 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 2 550 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lan4g0681 565 MobiDBLite consensus disorder prediction 112 142 - -
Lan4g0681 565 MobiDBLite consensus disorder prediction 85 154 - -
Lan4g0681 565 PIRSF Transl_init_eIF3d 1 546 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lan4g0681 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 2 550 - -
Lan4g0681 565 Coils Coil 117 142 - -
Lan4g0681 565 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 516 IPR007783 GO:0003743|GO:0005737|GO:0005852
Lan4g0681 565 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 528 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0681 Lan-Chr4 9303468 9307348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0681 1 563 Eukaryotic Initiation Factors Gene Family AT4G20980 74.787 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0681 K03251 - gmx:100799613 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0681 4 9303468 9307348 Lan19g0927 19 16645113 16671954 LSH