Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan4g0672 | ATGGGGGTGGAGTATTATGAGATATTGGAGGTTGAAAGAAGTGGCAGTGATGAAGATTTGAAGAAATCTTATAGAAAACTTGCTATGAAATGGCACCCTGATAAGAATCCAAACAATAAAAGAGAAGCTGAATCTAAATTCAAACAGATTTCTGAAGCCTATGAGGTTCTAAGTGATCCACAGAAGAGAGCAGTTTATGATCAGTATGGAGAAAATGGCCTTAAAAGTGGAATGTCACATCCGGACGCTGCTGGTGCTTCATTCTTCCATACTGGGAATGGTCCGACGACATTTGGGTTCAACCCGAGAAATGCTGACCATGTATTTGCTGAATTTTTTGGGTCTTCAAGCCCATTTGGAGGAGTGGGTGTTGGTCGTGGCGGTTGTGGTGGTGGTTGTGGTGGCTACGGCAGGGGCATGAAATTTGGGAATAGTTGGGTGTCAAGGTCCTTTGGTGGAATGTTTAGAGAAGACATGTTTAGTTCATCCGGAGAAGGCAGGCCTATGAATCAAGGTGCACCACGCAAAGCACCTCCTATCGAAAATACATTGCCTTGCAGCCTTGAGGAACTTTACAAGGGGACTACCAAGAAGTTGAAGATCACAAGGGAAGTTGTAGATGCAAGGGGGAAAATTGTGCCTGTGGAGGAAATCATAACCATTGAAATCAAACCTGGCTGGAAAAAGGGAACAAAAATAACTTTTGCAGAGAAAGGAAATGAGCAGCCAAATATTATTGCTGCAGATCTTGTTTTCATTATTGATGAGAAACCTCACAATGTGTTTAAAAGAGACGGTAATGATTTAGTGGTGACACAAAAGATATCGCTTGCAGATGCTGAAGCTCTTACAGGCTACACTGTCCGTCTTACAACTCTAGATGACAAGGATCTGACCATTACCATAAACAATGTGATTTATCCAAACTATGAAGAGGTGGTCCTCAAGGAAGGTATGCCGATTCCTAAAAATCCTTCACAGAGGGGTAACCTTAGGATCAAATTCAACATTGAAATTCCAAACAATGTTGACCCTGGTGCAGAGAGCCAGAATTAA | 1056 | 0.4223 | MGVEYYEILEVERSGSDEDLKKSYRKLAMKWHPDKNPNNKREAESKFKQISEAYEVLSDPQKRAVYDQYGENGLKSGMSHPDAAGASFFHTGNGPTTFGFNPRNADHVFAEFFGSSSPFGGVGVGRGGCGGGCGGYGRGMKFGNSWVSRSFGGMFREDMFSSSGEGRPMNQGAPRKAPPIENTLPCSLEELYKGTTKKLKITREVVDARGKIVPVEEIITIEIKPGWKKGTKITFAEKGNEQPNIIAADLVFIIDEKPHNVFKRDGNDLVVTQKISLADAEALTGYTVRLTTLDDKDLTITINNVIYPNYEEVVLKEGMPIPKNPSQRGNLRIKFNIEIPNNVDPGAESQN* | 352 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan4g0672 | 351 | MobiDBLite | consensus disorder prediction | 161 | 180 | - | - | |
Lan4g0672 | 351 | SMART | dnaj_3 | 3 | 62 | IPR001623 | - | |
Lan4g0672 | 351 | CDD | DnaJ | 4 | 59 | IPR001623 | - | |
Lan4g0672 | 351 | Gene3D | - | 259 | 341 | - | - | |
Lan4g0672 | 351 | Pfam | DnaJ domain | 4 | 67 | IPR001623 | - | |
Lan4g0672 | 351 | Pfam | DnaJ C terminal domain | 180 | 340 | IPR002939 | - | |
Lan4g0672 | 351 | CDD | DnaJ_C | 178 | 342 | - | - | |
Lan4g0672 | 351 | ProSitePatterns | Nt-dnaJ domain signature. | 47 | 66 | IPR018253 | - | |
Lan4g0672 | 351 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
Lan4g0672 | 351 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
Lan4g0672 | 351 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
Lan4g0672 | 351 | PRINTS | DnaJ domain signature | 62 | 81 | IPR001623 | - | |
Lan4g0672 | 351 | Gene3D | DnaJ domain | 3 | 122 | IPR036869 | - | |
Lan4g0672 | 351 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 342 | - | - | |
Lan4g0672 | 351 | PANTHER | DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE | 1 | 342 | - | - | |
Lan4g0672 | 351 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 261 | 344 | IPR008971 | GO:0006457|GO:0051082 | |
Lan4g0672 | 351 | Gene3D | - | 179 | 257 | - | - | |
Lan4g0672 | 351 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 174 | 269 | IPR008971 | GO:0006457|GO:0051082 | |
Lan4g0672 | 351 | SUPERFAMILY | Chaperone J-domain | 4 | 100 | IPR036869 | - | |
Lan4g0672 | 351 | ProSiteProfiles | dnaJ domain profile. | 4 | 70 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan4g0672 | Lan-Chr4 | 9263353 | 9266231 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan4g0672 | 5 | 69 | C2H2 Transcription Factor Family | AT1G74250 | 40.580 | 3.44e-10 | 59.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan4g0672 | K09510 | - | tcc:18596788 | 457.603 |