Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0672 ATGGGGGTGGAGTATTATGAGATATTGGAGGTTGAAAGAAGTGGCAGTGATGAAGATTTGAAGAAATCTTATAGAAAACTTGCTATGAAATGGCACCCTGATAAGAATCCAAACAATAAAAGAGAAGCTGAATCTAAATTCAAACAGATTTCTGAAGCCTATGAGGTTCTAAGTGATCCACAGAAGAGAGCAGTTTATGATCAGTATGGAGAAAATGGCCTTAAAAGTGGAATGTCACATCCGGACGCTGCTGGTGCTTCATTCTTCCATACTGGGAATGGTCCGACGACATTTGGGTTCAACCCGAGAAATGCTGACCATGTATTTGCTGAATTTTTTGGGTCTTCAAGCCCATTTGGAGGAGTGGGTGTTGGTCGTGGCGGTTGTGGTGGTGGTTGTGGTGGCTACGGCAGGGGCATGAAATTTGGGAATAGTTGGGTGTCAAGGTCCTTTGGTGGAATGTTTAGAGAAGACATGTTTAGTTCATCCGGAGAAGGCAGGCCTATGAATCAAGGTGCACCACGCAAAGCACCTCCTATCGAAAATACATTGCCTTGCAGCCTTGAGGAACTTTACAAGGGGACTACCAAGAAGTTGAAGATCACAAGGGAAGTTGTAGATGCAAGGGGGAAAATTGTGCCTGTGGAGGAAATCATAACCATTGAAATCAAACCTGGCTGGAAAAAGGGAACAAAAATAACTTTTGCAGAGAAAGGAAATGAGCAGCCAAATATTATTGCTGCAGATCTTGTTTTCATTATTGATGAGAAACCTCACAATGTGTTTAAAAGAGACGGTAATGATTTAGTGGTGACACAAAAGATATCGCTTGCAGATGCTGAAGCTCTTACAGGCTACACTGTCCGTCTTACAACTCTAGATGACAAGGATCTGACCATTACCATAAACAATGTGATTTATCCAAACTATGAAGAGGTGGTCCTCAAGGAAGGTATGCCGATTCCTAAAAATCCTTCACAGAGGGGTAACCTTAGGATCAAATTCAACATTGAAATTCCAAACAATGTTGACCCTGGTGCAGAGAGCCAGAATTAA 1056 0.4223 MGVEYYEILEVERSGSDEDLKKSYRKLAMKWHPDKNPNNKREAESKFKQISEAYEVLSDPQKRAVYDQYGENGLKSGMSHPDAAGASFFHTGNGPTTFGFNPRNADHVFAEFFGSSSPFGGVGVGRGGCGGGCGGYGRGMKFGNSWVSRSFGGMFREDMFSSSGEGRPMNQGAPRKAPPIENTLPCSLEELYKGTTKKLKITREVVDARGKIVPVEEIITIEIKPGWKKGTKITFAEKGNEQPNIIAADLVFIIDEKPHNVFKRDGNDLVVTQKISLADAEALTGYTVRLTTLDDKDLTITINNVIYPNYEEVVLKEGMPIPKNPSQRGNLRIKFNIEIPNNVDPGAESQN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0672 351 MobiDBLite consensus disorder prediction 161 180 - -
Lan4g0672 351 SMART dnaj_3 3 62 IPR001623 -
Lan4g0672 351 CDD DnaJ 4 59 IPR001623 -
Lan4g0672 351 Gene3D - 259 341 - -
Lan4g0672 351 Pfam DnaJ domain 4 67 IPR001623 -
Lan4g0672 351 Pfam DnaJ C terminal domain 180 340 IPR002939 -
Lan4g0672 351 CDD DnaJ_C 178 342 - -
Lan4g0672 351 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lan4g0672 351 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lan4g0672 351 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lan4g0672 351 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lan4g0672 351 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lan4g0672 351 Gene3D DnaJ domain 3 122 IPR036869 -
Lan4g0672 351 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 342 - -
Lan4g0672 351 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 342 - -
Lan4g0672 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 261 344 IPR008971 GO:0006457|GO:0051082
Lan4g0672 351 Gene3D - 179 257 - -
Lan4g0672 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 174 269 IPR008971 GO:0006457|GO:0051082
Lan4g0672 351 SUPERFAMILY Chaperone J-domain 4 100 IPR036869 -
Lan4g0672 351 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0672 Lan-Chr4 9263353 9266231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0672 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 3.44e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0672 K09510 - tcc:18596788 457.603