Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0671 ATGGAGGTCGAAGCAGATAACAATACTCAGAAGAGGGATGAAGAAGGTGATAATAGCAATGAGAATAACAATGGAAGTAACAGCAAAATCGTAAACTCGAATGAGGGTCAGAGCAGGCCCAAGCGTCAAATGAAAACTCCGTTTCAGCTTGAAATGCTAGAGAAAGCTTATGCAATGGAGACTTACCCCTCGGAGGAGACGAGGGCAGTGCTGTCGGAGAAGTTGGGGTTATCGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGAGGTTGAAGGAAAAGAAGGACTCGCAGCAAAAGAAGCTGGGGAAAATGGTGGCGGCGCCGACTTTGCTGGATTCCCCCATAGATGACATCAAATTGGGTCATGAACCTGGTAATGAATATGGATCAGTGTCAGGTTCTGGCTCCAGCCCTTTTACCAGTCTAGAGTTGAGGAATGTAGTGCCCCGGGCAGTGCCCGGGTACTATGAGTCACCGCAGACTATAATGGAGCTTAGAGCAATTGCCTGTGTGGAGGCACAATTAGGAGAGCCATTGAGGGAGGATGGACCTAGTCTCGGAATAGATTTTGATCCGTTGCCACCAGATGCTTTTGGGGCACCAATAGCTATTACAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAATAAAGTATATGAAAGACATGACGTTAGAACGAATAAGGCTATTGTAAGGACATTCCCTGAATATCCACTGTTTCTTCCAAATCAGTCTGCCACTAGGGTTGATGCTTTTGGTCAATTGGGCCCACCCCATTTACATGATCCAATGGAGGGTCCTACCAGAACACCTCCTTTTCCCATTGGAAATGAGCAAATACCCAGAAATCAAGCTACCCAAAGTCATTATTCTCGTATTAGCCAACCTGATAAGCATGGGATTCCCTATTCATCTCCTCCTCTAGACAATGATGTTGCCTCCCGGAGAGAGTTTTACACAAGCATAGCTGATGCTGGAACAAGTTCCCACTTTTCTGATCACCCAGTTGTTGGGCAAGATAATTCTTACGCTTTACCTGGTGGACAAGTTCCCCATAACGACACTGTGTTGCAAATGGAGAATAAAAAGAATGATGATACCAGAGTTGCAAGGGAAGTTGACGCCTATGAGACGAGGATCAGGAAAGAGCTTGAGAAACAAGATAATATGAGACGAAAGAATGAAGAGCGATTGAGGAAAGAGTTGGAGAGACAAGATCGTGAAAGAAAGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACTGCGAGAAGAGGAAAGATCAAAGCGTGAGCAAAAACGTGAAATAGAACGAAGGGAAAAGTTTATGCAGAAAGAAAATTTAAAAGCGGAGAAGAGGAGACAAAAAGAAGAGCTTCGCAGAGAGAAAGAGGCAGAAAGAAGAAAGGCTGCCCTTGAAAAGGCAGCTGCTCGTAGAATAGCCAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAACTGATGGAGTTGGCGGCAGCAAGCAAAGGACTATCCTCTATCATAAATCTTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCGTTGTGTGTTTTCCCACCTAAGAGTGTTAAGCTGAGAAAGCCATTTGCTATCAATCCCTGGATCAACTCAGAACAGAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTAATTACTTTTGCTGATGTTCTTGAGTTATGGCCTTTTACCCTTGACGAGTTCTTACAAGCATTTCATGACTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTCTTCTTAAGGTGATAATAAAAGACGTCGAAGATGTTGCTAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAGATTGTGGAAGGAGCATATTCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCTGCCGGATTTGGACCTCAGTTAAAGAAAAGAAATATTTCGTGGTCTTATGCAAATGATAAAAACGAGGGAAGAAGTGGTGAAGATATCATCTCTACACTTCGTAATGGTTCAGCCGCTCAAACTGCAGTGGCAAAAATGCACGAGAAAGGTCTGTTAGGTCCTCGAAGATCAAGGCACCGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCACGTTCTCTCGCTGGAGGGTAACAAGGGTTTGACAGTACTAGATCTTGCGGAAAAAATTCAGAAATCTGGTCTCCGGGACCTGACGACCAGCAAGACACCTGAAGCATCAATTTCTGTGGCTTTAACAAGAGATACTAAACTTTTTGAAAGAATAGCTCCATCAACATATCGTGTACGGTCTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCTATTCTTTCGGAAGCAAGAAAGAAAATACAAATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGTTGATGATGTTGAAAGAGAAGATTCAGAAAGTGATGAAGTTGATGAGGATCCTGAGATCGATGATTTAGTAAATCCTTCAAGTGTGATCCAAAATTCTGAACTGTATGGCGACACAAACATTTGCACATCAGATGTAAAAGAAAGTTTGGCTCATGATGTTGGACTCATTAAAAATGAGTTTGATAGTGATCTGCATTGTTTTCCTGAGAATGGCTCCAAGGATTCTGATTGTCCCACTTCTGTTTCCAAACAACCTCTTGCTTGTGCAGATTTGAATACACAAAATCTTGATCAAGATGATATTGAAATTGATGAAAGCAAGTCCGGAGAGTCTTGGGTTCAAGGTCTTACTGAAGGAGAATACTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGGAATTCAATCCGTGTTGTTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCTGAAGCTCAGATAGATAAAATTCGTCTAAAAGATGATATTTTCAGTAAATCAGATTTTCCATCACTTATTGGGAATCAAGTTGAAATACAATATACATATCCTGCTATAGAGGGTAACCAAAGCCCATTGCTTGACATTATTGTTAGCAATGTTAAAAATGAAGCATCGCCCAGCACTGCACAAAACCAAAAGGTAACTCCAATTGCACACAGGTTACCTGTGGAAAGGTCCTCGTCAGTTCAAGATTTATGCTCAGGGACAGGTCCAGACAATCCTCAGACTCAGGTACCTGCACCATATTCGAAAAGGTCACGTTCACAATTGAAATCTTATATTGCCCACATGGCAGAGGAGATGTATATCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGTAATAGATACTGGCTGTTTGTTGCATCTGTTTCTAGCAATGATCCTGGTTCTGGCAGGATCTTTGTTGAATGTCATGATGATGGCAAGTGGATGCTTATTGATTCCGAAGAGGCCTTTGATGTTCTTTTGACATCGCTGGATTCACGTGGGATCAGAGAATCACATTTGCGTTTAATGCTGAAAAAGATTGAGAGTTCTTTTAAAGAAAATGTTCGAAAGAATACACAATGTGCCAAAATTGAGTGTCCTAGCAGTACTCTTCATAGCTTGAACTCTGATACATCAGAAATTTCACCATCCTTCAAAATTGACCTTGGGAAAAGTGAGAGCGAGAAGAAAGCTGCCTTGAGGAGGTATCAAGATTTTCAAAAGTGGATGTGGAAAGAATGCCATAATTCATCAATACTATGTGCAATGAAATCTGGGATAAAGAGATGCAAACCTCAGGTGGACATTTGTGATACCTGTTTCAACCCTTATTTTATTGAAGACTCCCATTGCAATTCCTGCCACCGGACTTTCCCCGCAAATAATGGATTTAATTATTCCGAACATGCATTTGAATGTGAAGACAAGCTATCCAAAGATATTTGTATTTCAGAATCTTCCCTTCCTTTGCGGACAAGATTGCTTAAGTTCCTGTTGGCTTGTATTGAGGTATCTGTTCTGCATGAAGCATTTGGAACAATTTGGACAGATGATATTAGGAAGCGTTGGGGCATGAAGTTGAGCAAATCATCTTCTATTGAGGAACTTTTACAGATATTGTCTCTATTTGAGAGAGCACTACAACGGGATTTTCTATCTTCAAACTTCTCTACAACTGATGAATTGTTGGGATTGAGCAGTATGTCAGTAAGTACTGCACTTGCTTCTACTGATCCCGAGTTTGTTGCTGTACTTCCGTGGGTTCCACAAACTACTGCAGCATTGTCTCTCAGGCTTTTTGAGATTGATTCGTCCATCAGTTATGTAAAACCTGTGAAACCCGAGCCTCCTGAGGAGAAAGAAGCAAGAGAATACATAAAGCTCCCTTCGAGATATACTCCCTTCAAATTCAAGCAGGAAGTTGAACCAGCAGGATTAGACCATAATGAATTCATTCAGGATAAATCTGCTCCTAAGAAAGTTGTGCGAAGCGGCAATAAACGTGGACGAGGGTCTAAGGATCAAGGACGGGGTAAAAAGCTGTCTAAAAGACCGTACAATTCCAAACAAAATATTGGCCGCCGTGATGTTAAGGTCACTGAGAATCTAAGCCTCAAATTAAAACAACAGCAGGGACAAGGAACACAAGGACAGGCAGGTGGACGAGGGCGCCGGACGGTCAGGAAACGGAGGGTGGAAAAGAGAGCTGTTGAAGATTTGTTGCTTGGCAGTACGGCAGCTGGTCATAGCAACAAGATCAGTAGAGTACCAATGAGAAGCATGGATGTAGGTTGGGAAGTTAACAAGGCAAGTCCTGTAACTCATATCCACATGGATGTTGCTGATAACAGTAATAGTACTGAAGAGGTGGAATCTGATGATAATGCCCCAGCAGTAGAGTATGATAGAGGAAACTGGGAGATAGGTTTTAGTGGTGTTGCCCCGCACAACAGATGGAGTAATGATTTGGTCGGAATGAGTGATGAAGATGTGGATGCTTCTGAAGATGACAATGACAACAGCCTTGAAGAGCAAGAAGAAGAGGATTCAGAGGCAGATGTTATGAGTGAGGGTTCAGATGGCATTGCAAATAGAGTTGTAGTAAATGAAGACTCAGACTCGGCTGTCTCTGAAGATTCTTCGGATTAG 5193 0.425 MEVEADNNTQKRDEEGDNSNENNNGSNSKIVNSNEGQSRPKRQMKTPFQLEMLEKAYAMETYPSEETRAVLSEKLGLSDRQLQMWFCHRRLKEKKDSQQKKLGKMVAAPTLLDSPIDDIKLGHEPGNEYGSVSGSGSSPFTSLELRNVVPRAVPGYYESPQTIMELRAIACVEAQLGEPLREDGPSLGIDFDPLPPDAFGAPIAITEQQKRPSLAYDNKVYERHDVRTNKAIVRTFPEYPLFLPNQSATRVDAFGQLGPPHLHDPMEGPTRTPPFPIGNEQIPRNQATQSHYSRISQPDKHGIPYSSPPLDNDVASRREFYTSIADAGTSSHFSDHPVVGQDNSYALPGGQVPHNDTVLQMENKKNDDTRVAREVDAYETRIRKELEKQDNMRRKNEERLRKELERQDRERKKEEERLMRERLREEERSKREQKREIERREKFMQKENLKAEKRRQKEELRREKEAERRKAALEKAAARRIAKESMELIEDEQLELMELAAASKGLSSIINLDLDTLQNLESFRDSLCVFPPKSVKLRKPFAINPWINSEQNVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLLGEIHVALLKVIIKDVEDVARTPSTGLGVNQNGAANPGGGHPEIVEGAYSWGFDIRNWQKNLNQLTWPEIFRQLALSAGFGPQLKKRNISWSYANDKNEGRSGEDIISTLRNGSAAQTAVAKMHEKGLLGPRRSRHRLTPGTVKFAAFHVLSLEGNKGLTVLDLAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRSAFRKDPADAESILSEARKKIQIFENGFLAGEDVDDVEREDSESDEVDEDPEIDDLVNPSSVIQNSELYGDTNICTSDVKESLAHDVGLIKNEFDSDLHCFPENGSKDSDCPTSVSKQPLACADLNTQNLDQDDIEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKIRLKDDIFSKSDFPSLIGNQVEIQYTYPAIEGNQSPLLDIIVSNVKNEASPSTAQNQKVTPIAHRLPVERSSSVQDLCSGTGPDNPQTQVPAPYSKRSRSQLKSYIAHMAEEMYIYRSLPLGQDRRRNRYWLFVASVSSNDPGSGRIFVECHDDGKWMLIDSEEAFDVLLTSLDSRGIRESHLRLMLKKIESSFKENVRKNTQCAKIECPSSTLHSLNSDTSEISPSFKIDLGKSESEKKAALRRYQDFQKWMWKECHNSSILCAMKSGIKRCKPQVDICDTCFNPYFIEDSHCNSCHRTFPANNGFNYSEHAFECEDKLSKDICISESSLPLRTRLLKFLLACIEVSVLHEAFGTIWTDDIRKRWGMKLSKSSSIEELLQILSLFERALQRDFLSSNFSTTDELLGLSSMSVSTALASTDPEFVAVLPWVPQTTAALSLRLFEIDSSISYVKPVKPEPPEEKEAREYIKLPSRYTPFKFKQEVEPAGLDHNEFIQDKSAPKKVVRSGNKRGRGSKDQGRGKKLSKRPYNSKQNIGRRDVKVTENLSLKLKQQQGQGTQGQAGGRGRRTVRKRRVEKRAVEDLLLGSTAAGHSNKISRVPMRSMDVGWEVNKASPVTHIHMDVADNSNSTEEVESDDNAPAVEYDRGNWEIGFSGVAPHNRWSNDLVGMSDEDVDASEDDNDNSLEEQEEEDSEADVMSEGSDGIANRVVVNEDSDSAVSEDSSD* 1731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1496 1529 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1 48 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 285 308 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 404 439 - -
Lan4g0671 1730 Pfam DDT domain 552 606 IPR018501 -
Lan4g0671 1730 Pfam Homeodomain 39 95 IPR001356 GO:0003677
Lan4g0671 1730 ProSiteProfiles DDT domain profile. 550 609 IPR018501 -
Lan4g0671 1730 SMART testlast3 550 609 IPR018501 -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 833 856 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1496 1577 - -
Lan4g0671 1730 PANTHER HOMEOBOX DOMAIN PROTEIN 7 1212 - -
Lan4g0671 1730 PANTHER HOMEOBOX DOMAIN PROTEIN 1214 1730 - -
Lan4g0671 1730 SMART HOX_1 38 100 IPR001356 GO:0003677
Lan4g0671 1730 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1122 1195 IPR028941 -
Lan4g0671 1730 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1212 IPR044977 GO:0006357
Lan4g0671 1730 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1214 1730 IPR044977 GO:0006357
Lan4g0671 1730 ProSiteProfiles HARE-type HTH domain profile. 732 801 IPR007759 GO:0006355
Lan4g0671 1730 SUPERFAMILY Homeodomain-like 26 96 IPR009057 -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1668 1730 - -
Lan4g0671 1730 CDD homeodomain 39 95 IPR001356 GO:0003677
Lan4g0671 1730 Gene3D - 30 108 - -
Lan4g0671 1730 Coils Coil 375 477 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 20 44 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1676 1703 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1 19 - -
Lan4g0671 1730 Pfam HB1, ASXL, restriction endonuclease HTH domain 732 800 IPR007759 GO:0006355
Lan4g0671 1730 ProSiteProfiles 'Homeobox' domain profile. 36 96 IPR001356 GO:0003677
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1078 1100 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 1551 1568 - -
Lan4g0671 1730 MobiDBLite consensus disorder prediction 833 854 - -
Lan4g0671 1730 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 941 984 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0671 Lan-Chr4 9251209 9262932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0671 1 1578 Homeobox Transcription Factor Family AT1G28420 49.600 0.0 1309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lan4g0671 WSD 5.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0671 - - gmx:100777465 2371.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0671 4 9251209 9262932 Lan19g0914 19 16539900 16543016 LSH