Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0666 ATGAAAAAGGTTCTGAAGCGGAGCTGCAAGTCGGCATCACATAAGCTCTATAAGGACAAGGCGAAGAATCATGTCGATGATCTGCAAGTGATGTTCTTGGATTTACAGTTTGCCAGGAAGGAGAGCCGCACGGTTGATGTCGCACTCCTTGAGGAGCAAGTCCATCAGATGCTTCGGGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCAGCTTCTTCTCTGCAGCAAGGTGGTAGTCTTGGGTCGTTCTCGACCGATGTCTGTAGGTTACTACAGCTGTGTGAGGAGGAAGATGATGCTACTAGTCTATTAGCTGCTCCTAAGTCTGAGCCTTATGACCAGACTCTGCAGGCCCGTGCTGAGGTGCTATTACAAGAGGGCCAACATCACCATGATTACCCCTTGATTGATGAGTCCAAACACTCCACCTTTGGAGTTCACAATATGGCAGCTAACAACTTGAATGGGGCTGCTTTAGAGTATCACCAATATGACTTAAATCAGGATTTCAATAACGGCTTTTATGCTGGTTTTACCGGCACAGGTTATAATGACGAAGTTGCTGTTCCTTGTATATCTAGCTTTCTACCAAGCATCTGTCCTCCTCCTTCTGCTTTCTTAGGTCCAAAATGTGCACTCTGGGATTGTCCAAGGCCTGTGCAAGTGTTGGACTGGTGCCAGGACTATTGTAGTAGCTTTCATGCTACTCTTGCTTTGAATGAAGGACCACCAGGCATGGCCCCGGTTTTACGACCTGGGGGAATTGGACTGAAGGATAATTTGCTTTTTGTTGCCCTTACTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAGTGTGAGGGAGCAGCCACTGCAAAGTCTCCATGGAATGCACCTGAACTTTTTGATCTTTGTGTTCTTGAGGGTGAGAGTATTAGGGAGTGGCTTTTTTTCGATAAGCCTCGAAGAGCATTTGAGAGTGGCAACAGAAAGCAGAGGGCATTGCCAGATTATAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTGGTGAATGAGTTTGGAGGGCTGAAAAGATCTTATTATATGGATCCACAACCACTTAATCATTTTGAGTGGCACCTATACGAGTATGAAATTAGCAAGTGTGATGCATGCGCCTTATATCGGTTAGAACTAAAGCTTGTTGACGGGAAGAAGAGCTCCAAAGCAAAGGTAACAAGTGATTCAGTTGCTGATCTACAGAATCAGATGGGAAGGCTCTATGCCAAAGGCAGAGCCAAACTTAATGCCAAGGTTGGCATTGGTGGTGTCCATTCAGCACAAAATGGACCATATGAGCATGGGTTAGCTGCACCATATGACTATCTTGTCGAGAACACAGGTGAATATTATGTGACATGA 1386 0.4603 MKKVLKRSCKSASHKLYKDKAKNHVDDLQVMFLDLQFARKESRTVDVALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVCRLLQLCEEEDDATSLLAAPKSEPYDQTLQARAEVLLQEGQHHHDYPLIDESKHSTFGVHNMAANNLNGAALEYHQYDLNQDFNNGFYAGFTGTGYNDEVAVPCISSFLPSICPPPSAFLGPKCALWDCPRPVQVLDWCQDYCSSFHATLALNEGPPGMAPVLRPGGIGLKDNLLFVALTAKAQGKDVGIPECEGAATAKSPWNAPELFDLCVLEGESIREWLFFDKPRRAFESGNRKQRALPDYSGRGWHESRKQVVNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKAKVTSDSVADLQNQMGRLYAKGRAKLNAKVGIGGVHSAQNGPYEHGLAAPYDYLVENTGEYYVT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0666 461 PANTHER TRANSCRIPTION FACTOR VOZ1 1 461 IPR039277 GO:0006355|GO:0048578
Lan4g0666 461 PANTHER TRANSCRIPTION FACTOR VOZ1 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0666 Lan-Chr4 9211318 9214920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0666 3 460 VOZ-9 Transcription Factor Family AT1G28520 67.695 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lan4g0666 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0666 - - pvu:PHAVU_003G073700g 787.334