Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0664 ATGGACCAACAATATATAGTGTTTCTTCGTTTGCTTTTTCTTTTACATGTTCAGCTTGTAGCAGCACAAACATCCAGTCAAGACTTTTCTGGGCTACAATCTCTGACACAATCCTGGACTAACAAACCACCAAATTGGGTGGGTAAAGATCCTTGTGGCCGTAATTGGGACGGAATTCGTTGCACCGGTTCAAGAATTACCCAACTGAAGCTAGCAAGTTTAAATTTGGTGGGTCGGCTCAACTCAGCAATCCAGTCATTATCTGAACTAGACACAGTGGATCTCTCTTACAACACAGGCTTGACAGGAACAATTCCAAAAGAAATTGGGAATTTGAAAAAGCTAAAATCCCTTGCATTGGTTGGTTGTGGTTTCTTTGGTCCTATTCCAGACTCAATAGGATCTCTAAAGCAGCTAACCTTTCTAGCACTGAATTCTAATCGGTTCAGCGGAAGTATTCCACGCAGCATTGGCAATCTATCCAATGTTAATTGGCTAGATCTTGCTGATAACCAGCTTGAAGGACCTATTCCTGTCTCTGATGACCAAGGGCAACCAGGTCTTGACCTGCTCCTTAAAGCCCAACACTTTCATTTTGGGGACAATAAACTCTCTGGTCAAATACCACCAAATCTTTTCAACTCCAGTATGATTCTAGAACATGTGCTTTTCGACAATAATCAACTAGTTGGTACTATTCCACGCACCCTCAGTCTTGTGACCACATTGGAGGTTGTACGCTTTGATAGGAATGGATTAACCGGGGGAATGCCTTCAAACTTCAACAATCTCAAAAAACTTAGTGAACTCTATTTATCACACAACAAGTTCAATGGCTCTCTGCCGGATCTTACTGGAATGAATAGTCTCATCTATGTGGATATGAGTAACAATAGTTTCACTTCTTCTGATAATATCCCTTCATGGGTTACAAGTTCGGAAAGCCTGACGACTGTGATATTGGGGGACAACCAACTAAGTGGCACATTTAATATCAGCAAGGACTACAGCAACAGTCTGCAACTCATTAATTTGCAGAATAATGCCATAACTGAGTACAAGCCAGGAACCCAAAACATAAGTTTTAATGTGATACTTGCTGGCAATCCATTTTGTCTTGAAAATGGAGTTTCTGAACAGAGTTACTGCCAAGTACCTAAAGTCATTCCCTCATATTCAACACCACAAAATAATTGTGCACCTCAAACATGCAGTAACAGTCAGATTTCCAGTCCAAACTGTAAATGTGCATATCCCTATGAAGGAAGTCTCATTTCAAGAGCTCTTAGTATCTCAAACTTTAACACAAGTGACTATAAGGATATTGAGCAGTCTCTGATGGATAGTTTTGGACTCCAAAATCTTCCAGTGGATTCGGTTCGTTTGAGTGATCCAGTGAAGAATTCATCTACAAATAATTTTCAGTTTACTCTGAGTGTCTTCCCATCTCAAACTGATCGTTTCAATAGAACTGGAGTTTTACTCATTGCTTTTGTGCTAAGTAACCAAATCTATAAGCCCCCAGAGTTTTTCTCCCCTTACTTCTTCACTGGTTCTGGCTATGGATACTATGGAGGTGAACCTAAAAAATCAAGCACAGGACACACAGGGATTATGGTTGGTGCAGTACTTGCTGTTTTGGCCTTTCTTGTATTAGCAGTTCTTGTAGGGATATATGCCATCCACCAAAAAAGAAAAGCGCAAAGAACTAAAGAGCAGAACCCTTTTGTTAATTGGGAACAAACCAAGAATAGTGGCATTGCTCCTCAGTTGAAAGGAGCAAGATGGTTTTCTTTTGATGAGTTAAGCAGGTACACCAACAACTTCGCCAAAGCCAATACTATTGGCTATGGTGGCTATGGGCAGGTTTACCAAGGTGTTCTCCCCTCTGGGGAATTGGTTGCAATCAAACGGGCTGCAAACGAATCCATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAAAATCTTGTTAGTCTTGTTGGTTTCTGTTTTGAGAAGGATGAACAAATGCTGGTGTATGAGTACATTCCAAATGGCACCTTAATGGATAGTCTTTCAGGAAAGTCTGGGATCTGGATGGATTGGATAAGGAGGTTGAAAGTAACATTGGGTGCAGCAAAGGGTCTTTCCTATCTTCATGAACTTGCTAACCCACCAATCATACACAGGGACATAAAATCAGGCAATATCCTACTTGATAGTCATCTCAATGCAAAAGTTGCTGATTTTGGTCTCTGCAAACTTCTTCTTGATAGTGATAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGGTACTTGGATCCTGAATATTACATGACCCTGCAATTGACCGAAAAAAGTGATGTATATAGCTTTGGAGTGTTAATGCTGGAACTAGTAACAGCAAGAAGGCCAATAGAGCAAGGGAAGTATATTGTAAGAGAAGTAATAGGGGTAATGGATACATCAAAGGACTCATACAACCTTCATAACATTCTAGACCCAACCATAATTAAAGCCGGAAAGCCGAAAGGGTTAGAAAAGTTTGTGGAACTGGCATTGATGTGTGTCAATGAATATGGACATGAGAGGCCTTCAATGGCTGATGTTGTAAAAGAGGTTGAGAATATAATAGAGCTTGTTGGTTTGAATCCTAATTCTGAATCAGCTACAACATCAGAAGGCTATGATGTAGAGAAAGGTGGTAATGTTATACATCCTTATGTCAATGAAGATTTTAACTATAGTGGAATTGTTCCACCAGTAAAGCTAGAACCTAAATGA 2796 0.4031 MDQQYIVFLRLLFLLHVQLVAAQTSSQDFSGLQSLTQSWTNKPPNWVGKDPCGRNWDGIRCTGSRITQLKLASLNLVGRLNSAIQSLSELDTVDLSYNTGLTGTIPKEIGNLKKLKSLALVGCGFFGPIPDSIGSLKQLTFLALNSNRFSGSIPRSIGNLSNVNWLDLADNQLEGPIPVSDDQGQPGLDLLLKAQHFHFGDNKLSGQIPPNLFNSSMILEHVLFDNNQLVGTIPRTLSLVTTLEVVRFDRNGLTGGMPSNFNNLKKLSELYLSHNKFNGSLPDLTGMNSLIYVDMSNNSFTSSDNIPSWVTSSESLTTVILGDNQLSGTFNISKDYSNSLQLINLQNNAITEYKPGTQNISFNVILAGNPFCLENGVSEQSYCQVPKVIPSYSTPQNNCAPQTCSNSQISSPNCKCAYPYEGSLISRALSISNFNTSDYKDIEQSLMDSFGLQNLPVDSVRLSDPVKNSSTNNFQFTLSVFPSQTDRFNRTGVLLIAFVLSNQIYKPPEFFSPYFFTGSGYGYYGGEPKKSSTGHTGIMVGAVLAVLAFLVLAVLVGIYAIHQKRKAQRTKEQNPFVNWEQTKNSGIAPQLKGARWFSFDELSRYTNNFAKANTIGYGGYGQVYQGVLPSGELVAIKRAANESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKDEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVTLGAAKGLSYLHELANPPIIHRDIKSGNILLDSHLNAKVADFGLCKLLLDSDRGHVTTQVKGTMGYLDPEYYMTLQLTEKSDVYSFGVLMLELVTARRPIEQGKYIVREVIGVMDTSKDSYNLHNILDPTIIKAGKPKGLEKFVELALMCVNEYGHERPSMADVVKEVENIIELVGLNPNSESATTSEGYDVEKGGNVIHPYVNEDFNYSGIVPPVKLEPK* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0664 931 SUPERFAMILY Protein kinase-like (PK-like) 587 877 IPR011009 -
Lan4g0664 931 Pfam Protein kinase domain 610 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0664 931 CDD STKc_IRAK 615 881 - -
Lan4g0664 931 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Lan4g0664 931 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Lan4g0664 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Lan4g0664 931 Gene3D Transferase(Phosphotransferase) domain 1 685 896 - -
Lan4g0664 931 SUPERFAMILY L domain-like 32 372 - -
Lan4g0664 931 Gene3D Phosphorylase Kinase; domain 1 579 684 - -
Lan4g0664 931 ProSiteProfiles Protein kinase domain profile. 609 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0664 931 SMART serkin_6 609 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan4g0664 931 Gene3D Ribonuclease Inhibitor 186 371 IPR032675 -
Lan4g0664 931 PANTHER RECEPTOR-LIKE PROTEIN 55 2 905 - -
Lan4g0664 931 Gene3D Ribonuclease Inhibitor 18 185 IPR032675 -
Lan4g0664 931 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0664 Lan-Chr4 9197860 9204284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0664 8 931 Receptor kinase-like Gene Family AT5G49760 52.521 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lan4g0664 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0664 - - gmx:100786172 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0664 4 9197860 9204284 Lan19g0900 19 16406316 16412974 LSH
Lan4g0664 4 9197860 9204284 Lan16g0164 16 1268118 1274193 LSH