Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0663 ATGGCTTCTTCTAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCCAAGCCTTGCAACCCTCATCACCACCATTGGCAGCATGATATCACTTCTTCACTCATTTCAACTGCATGCAACAGAAGCCCTTACCCTTCAGCTGCAGGGTTTGAGGAGAGAAGTCCAGAACCAAAGCCAAGGTGGAATCCAAAACCAGAACAAATTAGGATCCTAGAAACAATATTCAACTCTGGAATGGTGAATCCTCCAAGAGATGAAATAAGAAAGATAAGGGCACAGTTACAAGAGTATGGTCAAGTTGGAGATGCCAATGTTTTTTACTGGTTCCAGAACCGCAAATCAAGGAGCAAGCATAAACTTAGACAACAACTCCAGAACTCAAAGAACAATTACCAGAACATTAACCCACCAGAACAACAACAACAACAACAACAACAAGAAAACACTGTTTCTCAACTCACTGCACCTTCATCTTCATCCTCTACCTCTGAGAAATCCCCACCAAAAGAAATAAGACCAACTAAGGTATTCTCTAGTGCCAGTGATGTTGTTATGGTGCCTAATTTTCCAACTACTTCTGTGAATCATAACTATTTGCCAGCACCACCACCTATATCTGAAGCTTTCTTCTTCCCAATGCAACATCATGGAAGAGGAGTTTTACCTAATAATAATAGTACCATACCTTCATCATCACAAGGATTTTGCTTCTCTGACCTTTCCAGTGTTGTTCAATCTCAACAACCACATGGTCAGCATAATGTTGGTCCTTGCACCAGTCTCCTGCTGAGTGAAATAATGAACCATGGTGCAGCATCCTCCAAAAATGGTCAAGATCAAGTTCAAGACAAGTATGTGAAATTAATGCACCCTTATTCCCACCTCAGTTTCTGTGTAACACCTACCACAGAAGTTAACATTGCCACCGTTATGCCTCCTCCTATCACCACCACCACCACAGTTACTGTTCCATCCCCCATCAATTTCACTCAAGTTCAAGGCATTGAAGATGAAAGTGTTACTCCAAAATCAACGGTGTTGATTAATGATGTAGCATTTGAAGTATCAGTTGGACCTTTCAACGTTCGAGATGCTTTTGGAAATGATGCTATGCTCATCCATTCCACTGGTCACCCTGTTCCCACTAACCACTTCGGTGTTACCCTCCACTCACTCCACCATGGCGCATCTTATTATTTGATAATTTAG 1209 0.421 MASSNRHWPSMFKSKPKPCNPHHHHWQHDITSSLISTACNRSPYPSAAGFEERSPEPKPRWNPKPEQIRILETIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRQQLQNSKNNYQNINPPEQQQQQQQQENTVSQLTAPSSSSSTSEKSPPKEIRPTKVFSSASDVVMVPNFPTTSVNHNYLPAPPPISEAFFFPMQHHGRGVLPNNNSTIPSSSQGFCFSDLSSVVQSQQPHGQHNVGPCTSLLLSEIMNHGAASSKNGQDQVQDKYVKLMHPYSHLSFCVTPTTEVNIATVMPPPITTTTTVTVPSPINFTQVQGIEDESVTPKSTVLINDVAFEVSVGPFNVRDAFGNDAMLIHSTGHPVPTNHFGVTLHSLHHGASYYLII* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0663 402 ProSiteProfiles 'Homeobox' domain profile. 54 119 IPR001356 GO:0003677
Lan4g0663 402 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 401 IPR044557 GO:0003700|GO:0050793
Lan4g0663 402 SMART HOX_1 56 123 IPR001356 GO:0003677
Lan4g0663 402 MobiDBLite consensus disorder prediction 1 25 - -
Lan4g0663 402 CDD homeodomain 57 119 IPR001356 GO:0003677
Lan4g0663 402 Gene3D - 58 126 - -
Lan4g0663 402 MobiDBLite consensus disorder prediction 45 65 - -
Lan4g0663 402 MobiDBLite consensus disorder prediction 129 167 - -
Lan4g0663 402 SUPERFAMILY Homeodomain-like 53 123 IPR009057 -
Lan4g0663 402 MobiDBLite consensus disorder prediction 129 176 - -
Lan4g0663 402 Pfam Homeodomain 58 118 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0663 Lan-Chr4 9193311 9195867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0663 1 402 Wox Gene Family AT2G33880 42.890 1.08e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan4g0663 Homeodomain 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0663 - - cam:101490093 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0663 4 9193311 9195867 Lan16g0165 16 1276841 1279307 LSH